RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 KCNK1O00180 336 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 LAMTOR5O43504 91 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ZMPSTE24O75844 475 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 NUDT14O95848 222 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CST3P01034 146 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 IFNA14P01570 189 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PRNPP04156 253 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 IFNA16P05015 189 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CFHP08603 1231 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 HOXB8P17481 243 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 FSHRP23945 695 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ADSSP30520 456 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 NME5P56597 212 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 UAP1L1Q3KQV9 507 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 FAAH2Q6GMR7 532 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 STRA8Q7Z7C7 330 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 EME1Q96AY2 570 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 MCRS1Q96EZ8 462 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC40Q9H9A6 602 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CYP4F12Q9HCS2 524 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 DERAQ9Y315 318 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 Q9Y3F1 56 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.64
CLCN6-202ENST00000346436 A0A0B4J269 797 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 ANXA6P08133 673 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 PIK3CGP48736 1102 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 USP39Q53GS9 565 aaKnown RBP11.02□□□□□ -0.64
CLCN6-202ENST00000346436 EOGTQ5NDL2 527 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 PHYKPLQ8IUZ5 450 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 FICDQ9BVA6 458 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 NEK6Q9HC98 313 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 TMEM59LQ9UK28 342 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 PADI3Q9ULW8 664 aa11.02□□□□□ -0.64
CLCN6-202ENST00000346436 XPO1O14980 1071 aaKnown RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 KRT33AO76009 404 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 CHI3L1P36222 383 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PTDSS1P48651 473 aaKnown RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 CDK16Q00536 496 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 ILF3Q12906 894 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 FLOT2Q14254 428 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 RNF43Q68DV7 783 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 TFAP2DQ7Z6R9 452 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 NECTIN4Q96NY8 510 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PRRG4Q9BZD6 226 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 SLC32A1Q9H598 525 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 RNPEPL1Q9HAU8 725 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 DMAC2Q9NW81 257 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 GID8Q9NWU2 228 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 TRHDEQ9UKU6 1024 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 C2CD2Q9Y426 696 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 RAD54BQ9Y620 910 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 RASGRP1O95267 797 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 SLC35G4P0C7Q5 338 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PDK4Q16654 411 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 LRRC49Q8IUZ0 686 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 MCEMP1Q8IX19 187 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 MAB21L3Q8N8X9 362 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 KIAA1143Q96AT1 154 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 KCNK16Q96T55 309 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 KIF13AQ9H1H9 1805 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 YDJCA8MPS7 323 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 GLRA3O75311 464 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PTPN7P35236 360 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 WSCD1Q658N2 575 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 SCAIQ8N9R8 606 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 AVL9Q8NBF6 648 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PYDC1Q8WXC3 89 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.65
CLCN6-202ENST00000346436 CDYLQ9Y232 598 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
CLCN6-202ENST00000346436 GNG14A0A1W2PPG7 69 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 APOC4-APOC2K7ER74 178 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 FZD9O00144 591 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ZBTB14O43829 449 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 TPST1O60507 370 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 JCHAINP01591 159 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 APOC2P02655 101 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CCDC130P13994 396 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 GRM5P41594 1212 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SLC1A6P48664 564 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CACNA2D1P54289 1103 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 RGS1Q08116 209 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 BOP1Q14137 746 aaKnown RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF268Q14587 947 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 FNBP1LQ5T0N5 605 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PDPK2PQ6A1A2 396 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 LRRC74BQ6ZQY2 392 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 TOP6BLQ8N6T0 577 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms