RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 VHLP40337 213 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 ACTR3P61158 418 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 PRKCZQ05513 592 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 CNGA3Q16281 694 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DDR2Q16832 855 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 SPATA6LQ8N4H0 392 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 LZTR1Q8N653 840 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 RTL3Q8N8U3 475 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DNAJC9Q8WXX5 260 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 STMN2Q93045 179 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 UROC1Q96N76 676 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 OR52B2Q96RD2 323 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 TRIM62Q9BVG3 475 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 GEMIN8Q9NWZ8 242 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DOCK4Q8N1I0 1966 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 LOC100653049A0A140TA62 436 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 TARM1B6A8C7 271 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 E9PBE3 544 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 NVLO15381 856 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DCXO43602 365 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 KLHL41O60662 606 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 KRT34O76011 436 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 PEX11BO96011 259 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 MPSTP25325 297 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DNAJB2P25686 324 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 MLLT6P55198 1093 aaPredicted RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 USP46P62068 366 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 DLG1Q12959 904 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 RANBP10Q6VN20 620 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 LRRC74BQ6ZQY2 392 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 PNPLA1Q8N8W4 532 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 TDRD5Q8NAT2 981 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 UNKQ9C0B0 810 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 RUVBL2Q9Y230 463 aaKnown RBP15.66■□□□□ 0.1
UPF3B-202ENST00000345865 TCAF1Q9Y4C2 921 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 CDY1Q9Y6F8 540 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 TMEM114B3SHH9 223 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 AP3B1O00203 1094 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 AURKAO14965 403 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 ZMPSTE24O75844 475 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 MYL4P12829 197 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 GRK4P32298 578 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 SLC1A2P43004 574 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 COPAP53621 1224 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 INHBEP58166 350 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 IHHQ14623 411 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 CLLU1OSQ5K130 101 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 ANO7Q6IWH7 933 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 ZYG11AQ6WRX3 759 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 MYLK4Q86YV6 388 aaPredicted RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 FSTL5Q8N475 847 aaPredicted RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 CFAP61Q8NHU2 1237 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 SCG3Q8WXD2 468 aaKnown RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 GPR78Q96P69 363 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 TRPV6Q9H1D0 765 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 FAM96AQ9H5X1 160 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 TREX1Q9NSU2 369 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 TLK1Q9UKI8 766 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 GRIA4P48058 902 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 GEMP55040 296 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 TRMT5Q32P41 509 aaKnown RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 FRMD7Q6ZUT3 714 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 KBTBD2Q8IY47 623 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF683Q8IZ20 524 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 TTC9BQ8N6N2 239 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 OSBPL1AQ9BXW6 950 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 WDR55Q9H6Y2 383 aaPredicted RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 NSMCE4AQ9NXX6 385 aa15.65■□□□□ 0.1
UPF3B-202ENST00000345865 IPO11Q9UI26 975 aaKnown RBP15.65■□□□□ 0.1
UPF3B-202ENST00000345865 GOLGA8QA0A0J9YX86 632 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 GOLGA8OA6NCC3 632 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 GOLGA8NF8WBI6 632 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 INPPL1O15357 1258 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 RPLP2P05387 115 aaKnown RBP15.64■□□□□ 0.09
UPF3B-202ENST00000345865 ELNP15502 786 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 HTR7P34969 479 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 HADHAP40939 763 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 NAGLUP54802 743 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 FCGRTP55899 365 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 DSC1Q08554 894 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 BLMHQ13867 455 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 MBTPS1Q14703 1052 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 MUM1Q2TAK8 710 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 CMPK2Q5EBM0 449 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 ARL13AQ5H913 290 aaPredicted RBP15.64■□□□□ 0.09
UPF3B-202ENST00000345865 FAM26DQ5JW98 314 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 C1orf146Q5VVC0 180 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 LIPMQ5VYY2 423 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 ZNF280DQ6N043 979 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 POTEHQ6S545 545 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 PPHLN1Q8NEY8 458 aaKnown RBP15.64■□□□□ 0.09
UPF3B-202ENST00000345865 GPR152Q8TDT2 470 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 STYXQ8WUJ0 223 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 LINC01599Q8WXQ3 324 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 MIEF2Q96C03 454 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 NXNL1Q96CM4 212 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 SLC39A13Q96H72 371 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 PPP1R36Q96LQ0 422 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms