RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SERPINB7O75635 380 aa19.58■□□□□ 0.73
HDAC4-201ENST00000345617 SLC12A4Q9UP95 1085 aa19.58■□□□□ 0.73
HDAC4-201ENST00000345617 LYVE1Q9Y5Y7 322 aa19.58■□□□□ 0.73
HDAC4-201ENST00000345617 HOXA2O43364 376 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 TRMUO75648 421 aaKnown RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 EIF2S3P41091 472 aaKnown RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 GPR1P46091 355 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 LYPLAL1Q5VWZ2 237 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 DNAJB7Q7Z6W7 309 aaPredicted RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 PIGBQ92521 554 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 FBXO32Q969P5 355 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 NT5MQ9NPB1 228 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 RRM1P23921 792 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 RRP1BQ14684 758 aaKnown RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 CWF19L1Q69YN2 538 aaKnown RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 TXNDC11Q6PKC3 985 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 VPS4AQ9UN37 437 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 SAMD4AQ9UPU9 718 aaKnown RBP19.58■□□□□ 0.72
HDAC4-201ENST00000345617 KBTBD13C9JR72 458 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 SMIM5Q71RC9 77 aa19.58■□□□□ 0.72
HDAC4-201ENST00000345617 CYP11B2P19099 503 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 CSPG5O95196 566 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ALDH7A1P49419 539 aaKnown RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 BTN3A2P78410 334 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PERM1Q5SV97 790 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 LIPMQ5VYY2 423 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 CITED4Q96RK1 184 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 AP3D1O14617 1153 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 DGKAP23743 735 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 SP8Q8IXZ3 490 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ARFIP1P53367 373 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PPIL2Q13356 520 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 TMPRSS11AQ6ZMR5 421 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF571Q7Z3V5 609 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 CREG2Q8IUH2 290 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 MCOLN2Q8IZK6 566 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 UBA3Q8TBC4 463 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 HGH1Q9BTY7 390 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 TPP1O14773 563 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 COX7A2P14406 83 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 OMPP47874 163 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ALDH9A1P49189 494 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ACADVLP49748 655 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 MMP14P50281 582 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 MAPKAPK3Q16644 382 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 FAM129BQ96TA1 746 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 FAM126AQ9BYI3 521 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 TRNAU1APQ9NX07 287 aaKnown RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 GGA3Q9NZ52 723 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PTTG2Q9NZH5 202 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PRMT5O14744 637 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 ENO2P09104 434 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PTPRNQ16849 979 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 SP100P23497 879 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 CDK9P50750 372 aaKnown RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 NFE2Q16621 373 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 EIF5AL1Q6IS14 154 aaKnown RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 HOPXQ9BPY8 73 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-201ENST00000345617 VPS28Q9UK41 221 aa19.57■□□□□ 0.72
HDAC4-201ENST00000345617 PTX3P26022 381 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF268Q14587 947 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 GIN1Q9NXP7 522 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ARF5P84085 180 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ZNHIT3Q15649 155 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 NKAPQ8N5F7 415 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 TMEM176AQ96HP8 235 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 NDUFB5O43674 189 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 LRG1P02750 347 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 AP4B1Q9Y6B7 739 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ALDH3A2P51648 485 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 CAMKK1Q8N5S9 505 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ADCY4Q8NFM4 1077 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ETNPPLQ8TBG4 499 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 TRMOQ9BU70 441 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 RUSC1Q9BVN2 902 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 TLR8Q9NR97 1041 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 CISHQ9NSE2 258 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 MKLN1Q9UL63 735 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 PEX16Q9Y5Y5 336 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ORC5O43913 435 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 MGAT5BQ3V5L5 792 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF484Q5JVG2 852 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 IFNGP01579 166 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 HHIPL2Q6UWX4 724 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 NOL11Q9H8H0 719 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 NECTIN3Q9NQS3 549 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 IFT80Q9P2H3 777 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 TPD52L2O43399 206 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 PRKG2Q13237 762 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 PLCL1Q15111 1095 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 MPZL3Q6UWV2 235 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 RAB2BQ8WUD1 216 aa19.56■□□□□ 0.72
HDAC4-201ENST00000345617 PTCD2Q8WV60 388 aaKnown RBP19.56■□□□□ 0.72
HDAC4-201ENST00000345617 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms