RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 C1QTNF1Q9BXJ1 281 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 ASB7Q9H672 318 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 TXNRD2Q9NNW7 524 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 GTF2IRD1Q9UHL9 959 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 FZD10Q9ULW2 581 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 PRORSD1PA6NEY8 169 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 DLX3O60479 287 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 DPYSQ14117 519 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 USP10Q14694 798 aaKnown RBP18.03■□□□□ 0.48
VHL-202ENST00000345392 HERC3Q15034 1050 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
VHL-202ENST00000345392 HMBOX1Q6NT76 420 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 RNF139Q8WU17 664 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 FAM149B1Q96BN6 582 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 TRPC7Q9HCX4 862 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 GMPR2Q9P2T1 348 aaKnown RBP18.03■□□□□ 0.48
VHL-202ENST00000345392 GINS2Q9Y248 185 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 SLC22A2O15244 555 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 HTRA2O43464 458 aaPredicted RBP18.03■□□□□ 0.48
VHL-202ENST00000345392 TIMM44O43615 452 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 TIPRLO75663 272 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 CTBSQ01459 385 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 RHDQ02161 417 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 SLC26A9Q7LBE3 791 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 FIBCD1Q8N539 461 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 IL22Q9GZX6 179 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 PNPLA3Q9NST1 481 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 CCDC167Q9P0B6 97 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 VTI1BQ9UEU0 232 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 AKT3Q9Y243 479 aa18.03■□□□□ 0.48
VHL-202ENST00000345392 POLR2AP24928 1970 aaKnown RBP18.03■□□□□ 0.48
VHL-202ENST00000345392 SCN1AP35498 2009 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 GAS2O43903 313 aaKnown RBP18.02■□□□□ 0.48
VHL-202ENST00000345392 USP2O75604 605 aaPredicted RBP18.02■□□□□ 0.48
VHL-202ENST00000345392 CABYRO75952 493 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 GNAO1P09471 354 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 HNRNPLP14866 589 aaKnown RBP eCLIP18.02■□□□□ 0.48
VHL-202ENST00000345392 NMBRP28336 390 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 MAGEA8P43361 318 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.48
VHL-202ENST00000345392 KDM1BQ8NB78 822 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.02■□□□□ 0.48
VHL-202ENST00000345392 IGSF9Q9P2J2 1179 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 XPR1Q9UBH6 696 aa18.02■□□□□ 0.48
VHL-202ENST00000345392 DDHD2O94830 711 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 C8BP07358 591 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 ARF4P18085 180 aaPredicted RBP18.02■□□□□ 0.47
VHL-202ENST00000345392 ADSLP30566 484 aaPredicted RBP18.02■□□□□ 0.47
VHL-202ENST00000345392 SULT1E1P49888 294 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 PITRM1Q5JRX3 1037 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 ZBTB49Q6ZSB9 765 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 SLC41A1Q8IVJ1 513 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 DEFB106AQ8N104 65 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 SMYD1Q8NB12 490 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 HMGCLL1Q8TB92 370 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 TSNARE1Q96NA8 513 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 CDC14AQ9UNH5 594 aa18.02■□□□□ 0.47
VHL-202ENST00000345392 SOCS2O14508 198 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 SDHDO14521 159 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 ZBTB24O43167 697 aaPredicted RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 AP2A1O95782 977 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 MCF2P10911 925 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 PTPN3P26045 913 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 ANO4Q32M45 955 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 DCAF6Q58WW2 860 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 MAMDC4Q6UXC1 1216 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 RPS27LQ71UM5 84 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 CENPLQ8N0S6 344 aaPredicted RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 GFM2Q969S9 779 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 OTUD5Q96G74 571 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 OSBPL6Q9BZF3 934 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 CLK4Q9HAZ1 481 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 PRMT7Q9NVM4 692 aaPredicted RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 GTSE1Q9NYZ3 720 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 SFMBT1Q9UHJ3 866 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 CEP350Q5VT06 3117 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 FBP2O00757 339 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 SLC35E2BP0CK96 405 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 TXNP10599 105 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 ETFBP38117 255 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 CBX3Q13185 183 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 MOB2Q70IA6 237 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 APOBEC3FQ8IUX4 373 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 NXNL1Q96CM4 212 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 ISOC1Q96CN7 298 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 BIRC8Q96P09 236 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 SLC39A3Q9BRY0 314 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 PLGRKTQ9HBL7 147 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 FAIMQ9NVQ4 179 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 DUS2Q9NX74 493 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 SUCOQ9UBS9 1254 aaKnown RBP18.01■□□□□ 0.47
VHL-202ENST00000345392 MID2Q9UJV3 735 aa18.01■□□□□ 0.47
VHL-202ENST00000345392 SH3PXD2BA1X283 911 aa18■□□□□ 0.47
VHL-202ENST00000345392 ZNF839A8K0R7 811 aa18■□□□□ 0.47
VHL-202ENST00000345392 FAM163BP0C2L3 166 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms