RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DPYSL2Q16555 572 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 WHAMMP3Q1A5X7 153 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.15
TPM4-202ENST00000344824 FAM72AQ5TYM5 149 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 FAM72DQ6L9T8 149 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 FAM72BQ86X60 149 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 MMAAQ8IVH4 418 aaKnown RBP14.08□□□□□ -0.15
TPM4-202ENST00000344824 MAP7D3Q8IWC1 876 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 STK40Q8N2I9 435 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 RMDN1Q96DB5 314 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 C1orf74Q96LT6 269 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 FEM1AQ9BSK4 669 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 EDEM2Q9BV94 578 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.15
TPM4-202ENST00000344824 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.15
TPM4-202ENST00000344824 ATP13A1Q9HD20 1204 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 VPS51Q9UID3 782 aa14.08□□□□□ -0.15
TPM4-202ENST00000344824 IGLV3-10A0A075B6K4 115 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 hCG_1818297A0A087WSY0 165 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 A0A0D9SEW6 157 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 DRGXA6NNA5 263 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 PRR5-ARHGAP8B1AHC4 643 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 H3BRJ5 948 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 CBX4O00257 560 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 EEF2KO00418 725 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 LRIG2O94898 1065 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 GLDCP23378 1020 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TPI1P60174 286 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ARHGAP8P85298 464 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 CKAP4Q07065 602 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 TUBB2AQ13885 445 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TRIM61Q5EBN2 209 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TFDP3Q5H9I0 405 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 LINGO4Q6UY18 593 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 Q6ZVU0 165 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 SETD3Q86TU7 594 aaPredicted RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 PSTKQ8IV42 348 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 RASGEF1CQ8N431 466 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ATP11CQ8NB49 1132 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 HAUS1Q96CS2 278 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TUBB2BQ9BVA1 445 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 CARD6Q9BX69 1037 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 AP1M1Q9BXS5 423 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 MIR1-1HGQ9H1L0 117 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ITM2CQ9NQX7 267 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 WSB2Q9NYS7 404 aaPredicted RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 CWC15Q9P013 229 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 TBC1D30Q9Y2I9 924 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 SPTBN2O15020 2390 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TMEM131Q92545 1883 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 A0A1W2PP55 124 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 FAM47DPA6NHR8 397 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 KHNYNO15037 678 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 MID1O15344 667 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 DAPK3O43293 454 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 IL1BP01584 269 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 AMPD1P23109 780 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 OXTRP30559 389 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 PLK1P53350 603 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 COPS2P61201 443 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ADCY2Q08462 1091 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 PPP2R5EQ16537 467 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ANKRD20A8PQ5CZ79 823 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 PLA2G2CQ5R387 149 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 SYCP2LQ5T4T6 812 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 IL31Q6EBC2 164 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 METTL3Q86U44 580 aaKnown RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 SYT12Q8IV01 421 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 DCAF4L2Q8NA75 395 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 KDM1BQ8NB78 822 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 ALG14Q96F25 216 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 CSPG4P5Q96PW8 444 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 EPAS1Q99814 870 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 OSBPL2Q9H1P3 480 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 RSPH9Q9H1X1 276 aaPredicted RBP14.07□□□□□ -0.16
TPM4-202ENST00000344824 RXFP3Q9NSD7 469 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 TMEM74BQ9NUR3 256 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
TPM4-202ENST00000344824 SHROOM3Q8TF72 1996 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 DOCK9Q9BZ29 2069 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 CACNA1EQ15878 2313 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 ANKRD36A6QL64 1941 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 ILVBLA1L0T0 632 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 FOXD2O60548 495 aaPredicted RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 CST8O60676 142 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 IL4RP24394 825 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 MAOBP27338 520 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 EPHB2P29323 1055 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 ACSL1P33121 698 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 C2orf54Q08AI8 447 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 DLG2Q15700 870 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 CST6Q15828 149 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms