RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RBM48Q5RL73 367 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 C1orf220Q5T0J3 134 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 DNAJC24Q6P3W2 148 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 INTS5Q6P9B9 1019 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 CYP4V2Q6ZWL3 525 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 CHSY3Q70JA7 882 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ADGRF2Q8IZF7 708 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 LSMEM1Q8N8F7 131 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 TDRD5Q8NAT2 981 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GIPC2Q8TF65 315 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 CRYGNQ8WXF5 182 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 SLC7A3Q8WY07 619 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 FAF2Q96CS3 445 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 KIFC3Q9BVG8 833 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ST6GALNAC4Q9H4F1 302 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 NOL6Q9H6R4 1146 aaKnown RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ZBTB26Q9HCK0 441 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF277Q9NRM2 450 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-201ENST00000343524 SYBUQ9NX95 663 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ADA2Q9NZK5 511 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 GMIPQ9P107 970 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 MTRRQ9UBK8 725 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF221Q9UK13 617 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 PCDHGA3Q9Y5H0 932 aa8.24□□□□□ -1.09
ATG4A-201ENST00000343524 TMEM191CA6NGB0 347 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 H0YAE9 185 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TMX2-CTNND1H3BSU7 103 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 HDAC3O15379 428 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 HOXC11O43248 304 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RFPL2O75678 378 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 APOA4P06727 396 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CCDC159P0C7I6 412 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TMEM191BP0C7N4 346 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CDH1P12830 882 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 IL10P22301 178 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PRDX5P30044 214 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 GDF10P55107 478 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 P2RX3P56373 397 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 COPZ1P61923 177 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 GALNT1Q10472 559 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 GRIK5Q16478 980 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF181Q2M3W8 571 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CCDC58Q4VC31 144 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RSBN1Q5VWQ0 802 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SEL1L3Q68CR1 1132 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 IGDCC3Q8IVU1 814 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ABRAQ8N0Z2 381 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 DHRSXQ8N5I4 330 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC4A11Q8NBS3 891 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TGFBRAP1Q8WUH2 860 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 USP13Q92995 863 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC45A3Q96JT2 553 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC29A1Q99808 456 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SH2D3AQ9BRG2 576 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ILKAPQ9H0C8 392 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ATP13A3Q9H7F0 1226 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SPC25Q9HBM1 224 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SPAG4Q9NPE6 437 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 KLHL11Q9NVR0 708 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 NARFQ9UHQ1 456 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CDYLQ9Y232 598 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CAB39Q9Y376 341 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 UGT2A1Q9Y4X1 527 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RAD54BQ9Y620 910 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RNF103-CHMP3A0A140T963 221 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TCRBV7S3A2A0A539 114 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 AQP12BA6NM10 295 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SOCS2O14508 198 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CST8O60676 142 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 DAB1O75553 588 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CSPG5O95196 566 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RASAL1O95294 804 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 LSM8O95777 96 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CSH1P0DML2 217 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CSH2P0DML3 217 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 FASP25445 335 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RRM2P31350 389 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 BMPR1AP36894 532 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ETV3P41162 512 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 MAGEA6P43360 314 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 HUNKP57058 714 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PSME3P61289 254 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ATP6AP1Q15904 470 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TAZQ16635 292 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PGS1Q32NB8 556 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 INAVAQ3KP66 663 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SPATS1Q496A3 300 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 MROH9Q5TGP6 573 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 NXNQ6DKJ4 435 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RGMBQ6NW40 437 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 DCUN1D2Q6PH85 259 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC22A16Q86VW1 577 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CDR2LQ86X02 465 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms