RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 IDH3BO43837 385 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 PORP16435 677 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ALOX12P18054 663 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 TALDO1P37837 337 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 RFX4Q33E94 735 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 FBXO47Q5MNV8 452 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 STRADAQ7RTN6 431 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 UBR7Q8N806 425 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 NPAS2Q99743 824 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 UNC93B1Q9H1C4 597 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ALG2Q9H553 416 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 CXorf21Q9HAI6 301 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 CENPXA8MT69 81 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 VPS26AO75436 327 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 LBPP18428 481 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 HMGCS2P54868 508 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 NFIAQ12857 509 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF484Q5JVG2 852 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 TXNDC11Q6PKC3 985 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 DQX1Q8TE96 717 aaKnown RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 FAM120BQ96EK7 910 aaKnown RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 DIABLOQ9NR28 239 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 LEF1Q9UJU2 399 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 TRIM43BA6NCK2 446 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 DDTLA6NHG4 134 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 RRN3P2A6NIE6 340 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ACKR2O00590 384 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 FAM155BO75949 473 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ATG7O95352 703 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ASS1P00966 412 aaKnown RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 PSMB4P28070 264 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 OAZ1P54368 228 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 CRADDP78560 199 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 SPATA19Q7Z5L4 167 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ADGRF2Q8IZF7 708 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 FADS3Q9Y5Q0 445 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 TEX264Q9Y6I9 313 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 TLL2Q9Y6L7 1015 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 IFRD1O00458 451 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ATP6V1G1O75348 118 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 LTA4HP09960 611 aaKnown RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 SLC7A1P30825 629 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 MSX2P35548 267 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 POC5Q8NA72 575 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 DNAJB14Q8TBM8 379 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ELMO3Q96BJ8 720 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ASIC4Q96FT7 647 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 SNRNP25Q9BV90 132 aaKnown RBP4.84□□□□□ -1.63
CSMD3-203ENST00000343508 ITGB4P16144 1822 aa4.84□□□□□ -1.63
CSMD3-203ENST00000343508 SMIM22K7EJ46 135 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 NRP2O60462 931 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CXCL8P10145 99 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ZYG11AQ6WRX3 759 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ALDH16A1Q8IZ83 802 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 SMYD1Q8NB12 490 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 POPDC2Q9HBU9 364 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 PREBQ9HCU5 417 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 KRCC1Q9NPI7 259 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 LIMD1Q9UGP4 676 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CDH9Q9ULB4 789 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CNTNAP2Q9UHC6 1331 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 EME2A4GXA9 379 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 UGT2B11O75310 529 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 TIPRLO75663 272 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CHRNB2P17787 502 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 POLR2EP19388 210 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 GSSP48637 474 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 TGFB2P61812 414 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 HPCAP84074 193 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 VPS72Q15906 364 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 SPOUT1Q5T280 376 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 NIPAL1Q6NVV3 410 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 FASTKD5Q7L8L6 764 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 PACRGLQ8N7B6 248 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 UBP1Q9NZI7 540 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 GSTK1Q9Y2Q3 226 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 LSM1O15116 133 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CCNT2O60583 730 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ATP6V1E1P36543 226 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ACAP2Q15057 778 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 SPATS1Q496A3 300 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF605Q86T29 641 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 SYTL1Q8IYJ3 562 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 SCAIQ8N9R8 606 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 BPIFB6Q8NFQ5 453 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 TBL1YQ9BQ87 522 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 NTPCRQ9BSD7 190 aaKnown RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 HGH1Q9BTY7 390 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 FANCEQ9HB96 536 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 RCOR3Q9P2K3 495 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-203ENST00000343508 PPM1HQ9ULR3 514 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 CAMTA1Q9Y6Y1 1673 aa4.84□□□□□ -1.64
CSMD3-203ENST00000343508 GRK3P35626 688 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CDK9P50750 372 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FSCN1Q16658 493 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 MARC1Q5VT66 337 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PHF21AQ96BD5 680 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CCDC106Q9BWC9 280 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms