RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 TP53INP1Q96A56 240 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 DGKBQ9Y6T7 804 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 HSPA14Q0VDF9 509 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 LDLRAP1Q5SW96 308 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 HYIQ5T013 277 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 NPAS2Q99743 824 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 DUSP9Q99956 384 aaKnown RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 COPS4Q9BT78 406 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 MMP13P45452 471 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 IL18R1Q13478 541 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 ATP13A4Q4VNC1 1196 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 PMM1Q92871 262 aa12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 FAM126AQ9BYI3 521 aaPredicted RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 WBP11Q9Y2W2 641 aaKnown RBP12.29□□□□□ -0.44
SEMA6A-202ENST00000343348 BIRC5O15392 142 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SNX3O60493 162 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 STX11O75558 287 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SCGNO76038 276 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 KDELR1P24390 212 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RXRGP48443 463 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 IL2P60568 153 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 CDC42P60953 191 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MYBPC1Q00872 1141 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SRSF11Q05519 484 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 TNK2Q07912 1038 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PLD1Q13393 1074 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 LPCAT4Q643R3 524 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 FAM171BQ6P995 826 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 LENG1Q96BZ8 264 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RSL24D1Q9UHA3 163 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SLC12A4Q9UP95 1085 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 H3BMM5 538 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 LSM1O15116 133 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 KPNA5O15131 536 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 TBX2Q13207 712 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PIGUQ9H490 435 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MROH8Q9H579 483 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MAT2BQ9NZL9 334 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNHIT2Q9UHR6 403 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ENOPH1Q9UHY7 261 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 AP3D1O14617 1153 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 NRP2O60462 931 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PIRTP0C851 137 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RPTNQ6XPR3 784 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 BRSK2Q8IWQ3 736 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 KLHL32Q96NJ5 620 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 BHLHE41Q9C0J9 482 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PDE2AO00408 941 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 BMP10O95393 424 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 INSRRP14616 1297 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.441e-7■■□□□ 13.4
SEMA6A-202ENST00000343348 PTPN3P26045 913 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 EPHA3P29320 983 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SLC26A3P40879 764 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PSME3P61289 254 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RPL38P63173 70 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 VPS72Q15906 364 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 APTXQ7Z2E3 356 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PTGR2Q8N8N7 351 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 KCTD4Q8WVF5 259 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 RCN3Q96D15 328 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 CRNNQ9UBG3 495 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNF232Q9UNY5 417 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ANKRD63C9JTQ0 380 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 CDH3P22223 829 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ABL2P42684 1182 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 C10orf107Q8IVU9 208 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 GLIS3Q8NEA6 775 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 PIWIL2Q8TC59 973 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MYLPFQ96A32 169 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SLCO1B3Q9NPD5 702 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SPG21Q9NZD8 308 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 AVILO75366 819 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 UNC5CO95185 931 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 CDK7P50613 346 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SLC6A3Q01959 620 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 FAM220AQ7Z4H9 259 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 REPS1Q96D71 796 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 SPAG4Q9NPE6 437 aa12.28□□□□□ -0.44
SEMA6A-202ENST00000343348 TRHDEQ9UKU6 1024 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms