RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 RDH11Q8TC12 318 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 AGPAT4Q9NRZ5 378 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 GMIPQ9P107 970 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 COPG1Q9Y678 874 aaKnown RBP18.76■□□□□ 0.59
SMPD1-201ENST00000342245 C16orf96A6NNT2 1141 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 EVPLLA8MZ36 301 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 KCNH1O95259 989 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
SMPD1-201ENST00000342245 MPOP05164 745 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 SHMT1P34896 483 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 MAGEA12P43365 314 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 AP3M2P53677 418 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 DLG2Q15700 870 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 SLC22A16Q86VW1 577 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 FAM20CQ8IXL6 584 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 ATL1Q8WXF7 558 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 TRIM63Q969Q1 353 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 CALN1Q9BXU9 219 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD1-201ENST00000342245 NYAP2Q9P242 653 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 G3V2L1 256 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 PIK3R2O00459 728 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 IL18RAPO95256 599 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SSTR3P32745 418 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 NRLP54845 237 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 PHC1P78364 1004 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 IFITM3Q01628 133 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CBX2Q14781 532 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TBCELQ5QJ74 424 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 GRTP1Q5TC63 336 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 NXNQ6DKJ4 435 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 KIAA1841Q6NSI8 718 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 FAM45BPQ6NSW5 357 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CRTC3Q6UUV7 619 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TMC5Q6UXY8 1006 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 NAPRTQ6XQN6 538 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CCDC81Q6ZN84 652 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 LINC00523Q86TU6 105 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 BPIFB6Q8NFQ5 453 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SLC7A14Q8TBB6 771 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 FAM45AQ8TCE6 357 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 ZNF516Q92618 1163 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 VPS33AQ96AX1 596 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 NAT9Q9BTE0 207 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 IL22Q9GZX6 179 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SNPHO15079 494 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 HOXC11O43248 304 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 UGT2B11O75310 529 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 MLNP12872 115 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TGM2P21980 687 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CSE1LP55060 971 aaKnown RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TNK2Q07912 1038 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CCDC58Q4VC31 144 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 RBM48Q5RL73 367 aaKnown RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 LRRC8EQ6NSJ5 796 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 ILDR2Q71H61 639 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 ERO1BQ86YB8 467 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 GRAMD2AQ8IUY3 354 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 Q8N9G6 341 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 SLC4A11Q8NBS3 891 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 BEST2Q8NFU1 509 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CSF3RQ99062 836 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 PCDH12Q9NPG4 1184 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TMEM181Q9P2C4 612 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 KLQ9UEF7 1012 aa18.75■□□□□ 0.59
SMPD1-201ENST00000342245 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-201ENST00000342245 TRPC5OSA6NMA1 111 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 GRID2O43424 1007 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 BCAS1O75363 584 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 RFPL2O75678 378 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 TOMM70O94826 608 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 ENDOD1O94919 500 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 PRKCAP17252 672 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 TFEBP19484 476 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 PRKACBP22694 351 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 EEF1B2P24534 225 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 NAMPTP43490 491 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 DMP1Q13316 513 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 SLC30A10Q6XR72 485 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 RNF19BQ6ZMZ0 732 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 EPHX4Q8IUS5 362 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 ARFGAP1Q8N6T3 406 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 CANT1Q8WVQ1 401 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 TP53INP1Q96A56 240 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 PGBD4Q96DM1 585 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 FBXL20Q96IG2 436 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 SNX18Q96RF0 628 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 LHPPQ9H008 270 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 SNX25Q9H3E2 840 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 TRIT1Q9H3H1 467 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 OXSMQ9NWU1 459 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 ARHGAP28Q9P2N2 729 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 PRORSD1PA6NEY8 169 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 TNNI1P19237 187 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms