RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CWC15Q9P013 229 aaKnown RBP15.7■□□□□ 0.1
VAPA-201ENST00000340541 FZD4Q9ULV1 537 aa15.7■□□□□ 0.1
VAPA-201ENST00000340541 FCF1Q9Y324 198 aaKnown RBP15.7■□□□□ 0.1
VAPA-201ENST00000340541 ZFHX4Q86UP3 3567 aa15.7■□□□□ 0.1
VAPA-201ENST00000340541 ADAMTS9Q9P2N4 1935 aa15.7■□□□□ 0.1
VAPA-201ENST00000340541 SPAARA0A1B0GVQ0 90 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 RASA4BC9J798 803 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 RASA4O43374 803 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 RNASEH2AO75792 299 aaKnown RBP15.69■□□□□ 0.1
VAPA-201ENST00000340541 RARAP10276 462 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 HCAR3P49019 387 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 DPYSQ14117 519 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 SMTNL2Q2TAL5 461 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 PARP15Q460N3 678 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 BOLA3Q53S33 107 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 PPP6R3Q5H9R7 873 aaPredicted RBP15.69■□□□□ 0.1
VAPA-201ENST00000340541 AFMIDQ63HM1 303 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 DSG4Q86SJ6 1040 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 CHST14Q8NCH0 376 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 CTNNBL1Q8WYA6 563 aaPredicted RBP15.69■□□□□ 0.1
VAPA-201ENST00000340541 HMCESQ96FZ2 354 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 OMDQ99983 421 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 FSCN3Q9NQT6 498 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 CTTNBP2NLQ9P2B4 639 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 UVRAGQ9P2Y5 699 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 NCKAP1Q9Y2A7 1128 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.69■□□□□ 0.1
VAPA-201ENST00000340541 SLCO1B1Q9Y6L6 691 aa15.69■□□□□ 0.1
VAPA-201ENST00000340541 MEI4A8MW99 385 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 MYO1FO00160 1098 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 PLK4O00444 970 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 HYAL3O43820 417 aaPredicted RBP15.68■□□□□ 0.1
VAPA-201ENST00000340541 BNIP3LO60238 219 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 ZNF883P0CG24 379 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 ERCC2P18074 760 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 CHRNA3P32297 505 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 NDST2P52849 883 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 SERINC3Q13530 473 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 TRIP6Q15654 476 aaKnown RBP15.68■□□□□ 0.1
VAPA-201ENST00000340541 IL27RAQ6UWB1 636 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 LEKR1Q6ZMV7 388 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 DPY19L3Q6ZPD9 716 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 RAB44Q7Z6P3 723 aaPredicted RBP15.68■□□□□ 0.1
VAPA-201ENST00000340541 ARHGAP12Q8IWW6 846 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 PCDH20Q8N6Y1 951 aaKnown RBP15.68■□□□□ 0.1
VAPA-201ENST00000340541 NPWQ8N729 165 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 PIP4K2CQ8TBX8 421 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 GANCQ8TET4 914 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 TEKT4Q8WW24 435 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 ISG20Q96AZ6 181 aaKnown RBP15.68■□□□□ 0.1
VAPA-201ENST00000340541 BIRC7Q96CA5 298 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 ORAI3Q9BRQ5 295 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 ZWILCHQ9H900 591 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 PCDHB9Q9Y5E1 797 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 WASF2Q9Y6W5 498 aa15.68■□□□□ 0.1
VAPA-201ENST00000340541 PROSCO94903 275 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 IGHV4-34P06331 123 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 ZNF135P52742 658 aaPredicted RBP15.67■□□□□ 0.1
VAPA-201ENST00000340541 ADPRHP54922 357 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 GEMIN4P57678 1058 aaKnown RBP15.67■□□□□ 0.1
VAPA-201ENST00000340541 CNTN1Q12860 1018 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 SFSWAPQ12872 951 aaKnown RBP15.67■□□□□ 0.1
VAPA-201ENST00000340541 POM121L1PQ3SYA9 428 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 CARD16Q5EG05 197 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 AGBL4Q5VU57 503 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 FAM46CQ5VWP2 391 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 POLNQ7Z5Q5 900 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 GLRX5Q86SX6 157 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 PLPP6Q8IY26 295 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 TMIEQ8NEW7 156 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 FAM71BQ8TC56 605 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 TSC1Q92574 1164 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 HSPH1Q92598 858 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 CELF6Q96J87 481 aaKnown RBP15.67■□□□□ 0.1
VAPA-201ENST00000340541 CCDC114Q96M63 670 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 SLC39A8Q9C0K1 460 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 PDFQ9HBH1 243 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 PCDH18Q9HCL0 1135 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.67■□□□□ 0.1
VAPA-201ENST00000340541 EIF2B4Q9UI10 523 aaKnown RBP15.67■□□□□ 0.1
VAPA-201ENST00000340541 HPCAL4Q9UM19 191 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 MFHAS1Q9Y4C4 1052 aa15.67■□□□□ 0.1
VAPA-201ENST00000340541 PLXNA2O75051 1894 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ZSCAN5CA6NGD5 496 aaPredicted RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 C1QTNF3-AMACRE9PGA6 284 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 BCAT2O15382 392 aaPredicted RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 SLC7A4O43246 635 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 BUB1O43683 1085 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 SH3BP5O60239 455 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 MTA2O94776 668 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 LCA5LO95447 670 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 FECHP22830 423 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 IL4RP24394 825 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ARSEP51690 589 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 CCNHP51946 323 aaPredicted RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 TAS2R38P59533 333 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 TAS2R40P59535 323 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 FAM193AP78312 1265 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 GRIK2Q13002 908 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms