RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CCNHP51946 323 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-202ENST00000340477 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 POM121L1PQ3SYA9 428 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-202ENST00000340477 PLPP6Q8IY26 295 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 OR2AP1Q8NGE2 309 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 OR2T34Q8NGX1 318 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 ZNF670Q9BS34 389 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 SLC39A8Q9C0K1 460 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 SMOC1Q9H4F8 434 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 C6orf106Q9H6K1 298 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-202ENST00000340477 SERGEFQ9UGK8 458 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 EPN1Q9Y6I3 576 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-202ENST00000340477 SPOPO43791 374 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 PRAMEF11O60813 436 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 FECHP22830 423 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 AMPD1P23109 780 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 ARSIQ5FYB1 569 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 PEAR1Q5VY43 1037 aaPredicted RBP19.52■□□□□ 0.72
SYNE4-202ENST00000340477 KIAA0895LQ68EN5 471 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 CHST14Q8NCH0 376 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 NSMCE1Q8WV22 266 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 LRIG1Q96JA1 1093 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 CALR3Q96L12 384 aaKnown RBP19.52■□□□□ 0.72
SYNE4-202ENST00000340477 KDM4CQ9H3R0 1056 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 SARDHQ9UL12 918 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.52■□□□□ 0.72
SYNE4-202ENST00000340477 ACTL7AQ9Y615 435 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 NUMA1Q14980 2115 aa19.52■□□□□ 0.72
SYNE4-202ENST00000340477 A0A1B0GTW7 788 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 KRIT1O00522 736 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 LEFTY1O75610 366 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 POP4O95707 220 aaKnown RBP19.51■□□□□ 0.71
SYNE4-202ENST00000340477 CTSLP07711 333 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 DRD3P35462 400 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 ATXN3P54252 364 aaPredicted RBP19.51■□□□□ 0.71
SYNE4-202ENST00000340477 ADPRHP54922 357 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 GSDMDP57764 484 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 TAS2R40P59535 323 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 CNTN1Q12860 1018 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 TCEAL6Q6IPX3 200 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 SLC23A3Q6PIS1 610 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 NCEH1Q6PIU2 408 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 ATPAF2Q8N5M1 289 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 NPWQ8N729 165 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 DNASE2BQ8WZ79 361 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 TSC1Q92574 1164 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 TCEAL3Q969E4 200 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 EDEM2Q9BV94 578 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 OSBPL1AQ9BXW6 950 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 KLC2Q9H0B6 622 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 KLHL11Q9NVR0 708 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 EIF2B4Q9UI10 523 aaKnown RBP19.51■□□□□ 0.71
SYNE4-202ENST00000340477 SLC6A14Q9UN76 642 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 GON4LQ3T8J9 2241 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 PI4KAP42356 2102 aa19.51■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3DA0A087WVF3 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3IA0A087WXS9 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3EA0A087X179 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3KA0A087X1G2 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 A0A0A6YYK5 440 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3FA6NER0 549 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3LB9A6J9 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF821O75541 412 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 PALMO75781 387 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 CD160O95971 181 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 SERPINF2P08697 491 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3HP0C7X1 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 HADHBP55084 474 aaKnown RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 IL10RBQ08334 325 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 DPYSL3Q14195 570 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 RFTN1Q14699 578 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 AFMIDQ63HM1 303 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3GQ6DHY5 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3CQ6IPX1 549 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 KIAA1328Q86T90 577 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TBC1D3Q8IZP1 549 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 BBS5Q8N3I7 341 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 ZCCHC9Q8N567 271 aaKnown RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 FAM71BQ8TC56 605 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 CINPQ9BW66 212 aaPredicted RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 TMEM74BQ9NUR3 256 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 IPO11Q9UI26 975 aaKnown RBP19.5■□□□□ 0.71
SYNE4-202ENST00000340477 WASF2Q9Y6W5 498 aa19.5■□□□□ 0.71
SYNE4-202ENST00000340477 LRRD1A4D1F6 860 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 PATE3B3GLJ2 98 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 J3KR12 359 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 BCAT2O15382 392 aaPredicted RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 PLRG1O43660 514 aaKnown RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 KRT1P04264 644 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 SYPP08247 313 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 ITGB7P26010 798 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 CD27P26842 260 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 MAOBP27338 520 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 CCR5P51681 352 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 NEK3P51956 506 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 NAP1L1P55209 391 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms