RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 C20orf27Q9GZN8 174 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 TRPM5Q9NZQ8 1165 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SCML2Q9UQR0 700 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 MTF2Q9Y483 593 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 CASP8AP2Q9UKL3 1982 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 E9PBE3 544 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 H0Y626 953 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SYN3O14994 580 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 MATN3O15232 486 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 FGF10O15520 208 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 KLHL41O60662 606 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SEC24AO95486 1093 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 RPSAP08865 295 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 TACR2P21452 398 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 PMLP29590 882 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 WEE1P30291 646 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ATXN3P54252 364 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SNCBQ16143 134 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ANO4Q32M45 955 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 LONP2Q86WA8 852 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 PHF21BQ96EK2 531 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 NMUR2Q9GZQ4 415 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 IL22Q9GZX6 179 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 GTSE1Q9NYZ3 720 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 TLR6Q9Y2C9 796 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 OR6C75A6NL08 312 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 H7C4K7 107 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SKAP2O75563 359 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 FSBPO95073 299 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 URODP06132 367 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC2A3P11169 496 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 VEPH1Q14D04 833 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 CCDC6Q16204 474 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 PDCD2Q16342 344 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF789Q5FWF6 425 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 TMC7Q7Z402 723 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ARL14EPQ8N8R7 260 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SPPL2BQ8TCT7 592 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 CCDC124Q96CT7 223 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 BTN2A3PQ96KV6 586 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 FAM96AQ9H5X1 160 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 FAM8A1Q9UBU6 413 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ARL5AQ9Y689 179 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 FCHO1O14526 889 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SNAP91O60641 907 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 GLRA3O75311 464 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RHOCP08134 193 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RALBP11234 206 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CPA3P15088 417 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 NQO1P15559 274 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 EPHB1P54762 984 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 AIF1P55008 147 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SMAD3P84022 425 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 GPR17Q13304 367 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 FAM26DQ5JW98 314 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 MAB21L3Q8N8X9 362 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 LPCAT1Q8NF37 534 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 C10orf82Q8WW14 230 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 HDAC10Q969S8 669 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 WBP2Q969T9 261 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 GRAMD1AQ96CP6 724 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 HAPLN3Q96S86 360 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 OSBPL2Q9H1P3 480 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 ARL8BQ9NVJ2 186 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 MOCS1Q9NZB8 636 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 MYL4P12829 197 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC1A2P43004 574 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC1A6P48664 564 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SERPINB8P50452 374 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RENBPP51606 427 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SGSHP51688 502 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 NIPAL4Q0D2K0 466 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RBM20Q5T481 1227 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CNSTQ6PJW8 725 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 ARHGAP18Q8N392 663 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CPNE1Q99829 537 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CINPQ9BW66 212 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 MRPL9Q9BYD2 267 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 ABCG8Q9H221 673 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 TXLNGQ9NUQ3 528 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 FAM95CA0A1B0GW59 222 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SRRM3A6NNA2 597 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 BPGMP07738 259 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CCNCP24863 283 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC11A2P49281 568 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CSE1LP55060 971 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 RASA2Q15283 850 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 HECTD3Q5T447 861 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 CES4AQ5XG92 561 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 LINC00523Q86TU6 105 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 SNX31Q8N9S9 440 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 MTBPQ96DY7 904 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 FUBP3Q96I24 572 aaKnown RBP eCLIP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms