RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ARSIQ5FYB1 569 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SPDYCQ5MJ68 293 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 FAM46CQ5VWP2 391 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 NCBP2-AS2Q69YL0 99 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 RYBPQ8N488 228 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CCDC112Q8NEF3 446 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 GRIN3AQ8TCU5 1115 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CALR3Q96L12 384 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 HSPA12BQ96MM6 686 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 BTBD1Q9H0C5 482 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SP110Q9HB58 689 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 C3orf70A6NLC5 250 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ARHGAP6O43182 974 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PSTPIP1O43586 416 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 MFSD11O43934 449 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 LEFTY1O75610 366 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PRNPP04156 253 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 KRT1P04264 644 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SNRPD1P62314 119 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ZNF33AQ06730 810 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 KIF5AQ12840 1032 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SFSWAPQ12872 951 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CYTH1Q15438 398 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 CCDC6Q16204 474 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ODF2Q5BJF6 829 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 LYSMD4Q5XG99 296 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PLPP6Q8IY26 295 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PQLC3Q8N755 202 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 TMIEQ8NEW7 156 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 OR6K2Q8NGY2 324 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ZNF419Q96HQ0 510 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 RNF157Q96PX1 679 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 HEPHQ9BQS7 1158 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 SGK2Q9HBY8 427 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 DDX56Q9NY93 547 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 IPO11Q9UI26 975 aaKnown RBP15.51■□□□□ 0.07
UBE3B-201ENST00000340074 FZD4Q9ULV1 537 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 PCDHGA5Q9Y5G8 931 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 WASF2Q9Y6W5 498 aa15.51■□□□□ 0.07
UBE3B-201ENST00000340074 MACROD2A1Z1Q3 448 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 BCLAF3A2AJT9 711 aaKnown RBP15.5■□□□□ 0.07
UBE3B-201ENST00000340074 ZNF487B1APH4 448 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 KPNA3O00505 521 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-201ENST00000340074 PALMO75781 387 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 MAP3K6O95382 1288 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 SEMA4FO95754 770 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 GSRP00390 522 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 ITPKAP23677 461 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 GKP32189 559 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 MPLP40238 635 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 RHOAP61586 193 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 IL10RBQ08334 325 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 CNTN1Q12860 1018 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-201ENST00000340074 CYP2U1Q7Z449 544 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 TXLNBQ8N3L3 684 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 CADM4Q8NFZ8 388 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 PIGKQ92643 395 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-201ENST00000340074 EXOC2Q96KP1 924 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 C6orf106Q9H6K1 298 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-201ENST00000340074 PARD6AQ9NPB6 346 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 LHX3Q9UBR4 397 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 ADGRG1Q9Y653 693 aa15.5■□□□□ 0.07
UBE3B-201ENST00000340074 TRPM6Q9BX84 2022 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
UBE3B-201ENST00000340074 GRID2IPA4D2P6 1211 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 FAM47DPA6NHR8 397 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 KRIT1O00522 736 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 MAFKO60675 156 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 IGSF6O95976 241 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 TGM1P22735 817 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 CCZ1BP86790 482 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 CCZ1P86791 482 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-201ENST00000340074 MYLK3Q32MK0 819 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 MFSD7Q6UXD7 560 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 VSIG1Q86XK7 387 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 ATPAF2Q8N5M1 289 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 OR14C36Q8NHC7 312 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 FOXJ1Q92949 421 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 FAM131CQ96AQ9 280 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 VOPP1Q96AW1 172 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 ARRDC3Q96B67 414 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 GDAP1L1Q96MZ0 367 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 MAK16Q9BXY0 300 aaKnown RBP15.49■□□□□ 0.07
UBE3B-201ENST00000340074 SMOC1Q9H4F8 434 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 TMEM74BQ9NUR3 256 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 GVINP1Q7Z2Y8 2422 aa15.49■□□□□ 0.07
UBE3B-201ENST00000340074 LRRK1Q38SD2 2015 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 METTL12A8MUP2 240 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 LRP3O75074 770 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms