RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CORO1AP31146 461 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 RGRP47804 291 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ALDH1A3P47895 512 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 LBX1P52954 281 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MPP1Q00013 466 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 PDE1BQ01064 536 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SERINC3Q13530 473 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 HNRNPDQ14103 355 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SEPT6Q14141 434 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 PRPSAP1Q14558 356 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF460Q14592 562 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TAF12Q16514 161 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 FSCBQ5H9T9 825 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 COL13A1Q5TAT6 717 aaPredicted RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 CCDC121Q6ZUS5 278 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TRPM8Q7Z2W7 1104 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 LDB1Q86U70 411 aaPredicted RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MFSD6LQ8IWD5 586 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ARL14EPQ8N8R7 260 aaPredicted RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 ARRDC2Q8TBH0 407 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SPON2Q9BUD6 331 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 FSD1LQ9BXM9 530 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 IL22Q9GZX6 179 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SSU72Q9NP77 194 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 OLA1Q9NTK5 396 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SPG21Q9NZD8 308 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 AGO1Q9UL18 857 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 SOX13Q9UN79 622 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 TRIM33Q9UPN9 1127 aa7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 AAR2Q9Y312 384 aaKnown RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MTF2Q9Y483 593 aaPredicted RBP7.51□□□□□ -1.21
SRFBP1-201ENST00000339397 MYLKQ15746 1914 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 TRIOO75962 3097 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 FAM237BA0A1B0GVD1 139 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 OR51F1A6NGY5 319 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 KIAA0754O94854 1291 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 GSTA2P09210 222 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 NEFHP12036 1026 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 NDST2P52849 883 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 RING1Q06587 406 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SMARCB1Q12824 385 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 MSLNQ13421 630 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF789Q5FWF6 425 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SPANXN3Q5MJ09 141 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 N4BP2L1Q5TBK1 243 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 NAPEPLDQ6IQ20 393 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 KDELC1Q6UW63 502 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 LINGO4Q6UY18 593 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ANKS4BQ8N8V4 417 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SH3RF2Q8TEC5 729 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 C2orf15Q8WU43 125 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ALKBH8Q96BT7 664 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ZFRQ96KR1 1074 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 KIFC1Q9BW19 673 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 VPS11Q9H270 941 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SUDS3Q9H7L9 328 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 PLK2Q9NYY3 685 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 TMEM216Q9P0N5 145 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 UXTQ9UBK9 157 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ERI2A8K979 691 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 F5H5T6 163 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 TGM5O43548 720 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 FGF18O76093 207 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 PARNO95453 639 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 KITP10721 976 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 HOXD9P28356 352 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 TYK2P29597 1187 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ARRB2P32121 409 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 AVPR1AP37288 418 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 CCNFP41002 786 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SCTRP47872 440 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ARCN1P48444 511 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 HARS2P49590 506 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 RENBPP51606 427 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 CYP4F8P98187 520 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ZNF33AQ06730 810 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 LGSNQ5TDP6 509 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 IL31Q6EBC2 164 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 GAREM2Q75VX8 874 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 KLHDC8BQ8IXV7 354 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 MICALL1Q8N3F8 863 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 WFDC5Q8TCV5 224 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ADAMTS19Q8TE59 1207 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 CDKL2Q92772 493 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 IMP4Q96G21 291 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 PRR11Q96HE9 360 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 SEMA3CQ99985 751 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 NAT9Q9BTE0 207 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 IQCGQ9H095 443 aaKnown RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 TRPM5Q9NZQ8 1165 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 MARCOQ9UEW3 520 aaPredicted RBP7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 CAPN7Q9Y6W3 813 aa7.5□□□□□ -1.21
SRFBP1-201ENST00000339397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.49□□□□□ -1.21
SRFBP1-201ENST00000339397 PHGDHO43175 533 aaKnown RBP7.49□□□□□ -1.21
SRFBP1-201ENST00000339397 ITM2AO43736 263 aa7.49□□□□□ -1.21
SRFBP1-201ENST00000339397 SNAP91O60641 907 aa7.49□□□□□ -1.21
SRFBP1-201ENST00000339397 LILRB3O75022 631 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms