RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LRRC32Q14392 662 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 IHHQ14623 411 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 KCTD19Q17RG1 926 aaPredicted RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 C9orf64Q5T6V5 341 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 SERPINA13PQ6UXR4 307 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 METTL3Q86U44 580 aaKnown RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 CHPFQ8IZ52 775 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 ZNF567Q8N184 647 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 PCDH20Q8N6Y1 951 aaKnown RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 FAM71DQ8N9W8 422 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 GLIS1Q8NBF1 620 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 TXNDC5Q8NBS9 432 aaKnown RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 OR2A12Q8NGT7 310 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 TEKT5Q96M29 485 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 DDX47Q9H0S4 455 aaKnown RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 TNKS2Q9H2K2 1166 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 POLR3BQ9NW08 1133 aaPredicted RBP17.78■□□□□ 0.44
CHGA-202ENST00000334654 SEPT10Q9P0V9 454 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 SEPT3Q9UH03 358 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 SIT1Q9Y3P8 196 aa17.78■□□□□ 0.44
CHGA-202ENST00000334654 CFAP69A5D8W1 941 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 C5orf60A6NFR6 353 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 RNF103O00237 685 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 GJB3O75712 270 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 RPS9P46781 194 aaKnown RBP17.77■□□□□ 0.44
CHGA-202ENST00000334654 FNTAP49354 379 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.44
CHGA-202ENST00000334654 ACCSLQ4AC99 568 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 HSF5Q4G112 596 aaPredicted RBP17.77■□□□□ 0.44
CHGA-202ENST00000334654 ATXN7L2Q5T6C5 722 aaPredicted RBP17.77■□□□□ 0.44
CHGA-202ENST00000334654 ALG1LQ6GMV1 187 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 CCDC137Q6PK04 289 aaKnown RBP17.77■□□□□ 0.44
CHGA-202ENST00000334654 Q6ZVU0 165 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 PRUNE1Q86TP1 453 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 PLPP6Q8IY26 295 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 FLCNQ8NFG4 579 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 ATL2Q8NHH9 583 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 CCDC26Q8TAB7 109 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 NSMCE1Q8WV22 266 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 MGME1Q9BQP7 344 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 CINPQ9BW66 212 aaPredicted RBP17.77■□□□□ 0.44
CHGA-202ENST00000334654 TM6SF2Q9BZW4 377 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 NT5MQ9NPB1 228 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 C2orf42Q9NWW7 574 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 MMP17Q9ULZ9 603 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 NEU2Q9Y3R4 380 aa17.77■□□□□ 0.44
CHGA-202ENST00000334654 ANKRD36A6QL64 1941 aa17.77■□□□□ 0.43
CHGA-202ENST00000334654 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 A0A1W2PQF6 199 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 TTC24A2A3L6 582 aaPredicted RBP17.76■□□□□ 0.43
CHGA-202ENST00000334654 CCDC188H7C350 402 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 STK25O00506 426 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ZBTB24O43167 697 aaPredicted RBP17.76■□□□□ 0.43
CHGA-202ENST00000334654 GCATO75600 419 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 SLC34A2O95436 690 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ETS1P14921 441 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 COL9A1P20849 921 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 CHRNA3P32297 505 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 MAXP61244 160 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 RHOAP61586 193 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 CAMK2GQ13555 558 aaPredicted RBP17.76■□□□□ 0.43
CHGA-202ENST00000334654 E2F5Q15329 346 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 CARD16Q5EG05 197 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ANKRD20A2Q5SQ80 823 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ANKRD20A1Q5TYW2 823 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ANKRD20A3Q5VUR7 823 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 KIAA1211LQ6NV74 962 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 DPY19L3Q6ZPD9 716 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 OR2AP1Q8NGE2 309 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 ARRDC2Q8TBH0 407 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 EXOC2Q96KP1 924 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 AGAP3Q96P47 875 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 FAM129BQ96TA1 746 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 VAT1Q99536 393 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
CHGA-202ENST00000334654 CHRDQ9H2X0 955 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 EPHX3Q9H6B9 360 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 PRSS16Q9NQE7 514 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
CHGA-202ENST00000334654 SUN2Q9UH99 717 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 PCYOX1Q9UHG3 505 aa17.76■□□□□ 0.43
CHGA-202ENST00000334654 EDDM13A0A1B0GTR0 161 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 TARSL2A2RTX5 802 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 SIN3BO75182 1162 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 GSRP00390 522 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 EPHX1P07099 455 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 DCNP07585 359 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 PTGIRP43119 386 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 CSNK1DP48730 415 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 C2orf54Q08AI8 447 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 NIPAL4Q0D2K0 466 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 ZNF235Q14590 738 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 TMEM92Q6UXU6 159 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 TRMT11Q7Z4G4 463 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 CCDC110Q8TBZ0 833 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 GORASP1Q9BQQ3 440 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 MFSD1Q9H3U5 465 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 CACNA1IQ9P0X4 2223 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms