RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 AHI1Q8N157 1196 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 PHF10Q8WUB8 498 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 LTN1O94822 1766 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 IDO1P14902 403 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 UGT1A5P35504 534 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 EIF2B2P49770 351 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TRIM40Q6P9F5 258 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 LGI2Q8N0V4 545 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 REXO5Q96IC2 774 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 SEMA6BQ9H3T3 888 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 PCID2Q5JVF3 399 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TFAP2DQ7Z6R9 452 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 FAM136AQ96C01 138 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 FAM210AQ96ND0 272 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 OMDQ99983 421 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ITGAVP06756 1048 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ATP5C1P36542 298 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 DCTN2Q13561 401 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TCHHL1Q5QJ38 904 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 NET1Q7Z628 596 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 MARCH10Q8NA82 808 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 C1QTNF3-AMACRE9PGA6 284 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TNK2Q07912 1038 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 MUC13Q9H3R2 512 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ABHD2P08910 425 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 CSH1P0DML2 217 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 CSH2P0DML3 217 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TBCDQ9BTW9 1192 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 CMTM6Q9NX76 183 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 LEF1Q9UJU2 399 aaPredicted RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 TRPV2Q9Y5S1 764 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 CHKAP35790 457 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 NECTIN3Q9NQS3 549 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 NDOR1Q9UHB4 597 aa16.82■□□□□ 0.28
PDZD8-201ENST00000334464 MRPS33Q9Y291 106 aaKnown RBP16.82■□□□□ 0.28
PDZD8-201ENST00000334464 ASGR1P07306 291 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 SMARCB1Q12824 385 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 RIT1Q92963 219 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 SUCOQ9UBS9 1254 aaKnown RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 POMCP01189 267 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 GMFBP60983 142 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 OLR1P78380 273 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 FSCN1Q16658 493 aaKnown RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ABRAXAS1Q6UWZ7 409 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 FAM46CQ5VWP2 391 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 NEPROQ6NW34 567 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 PIWIL4Q7Z3Z4 852 aaKnown RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 EEF1AKMT1Q8WVE0 214 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ZKSCAN4Q969J2 545 aaPredicted RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 SIGLEC16A6NMB1 481 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 NOS2P35228 1153 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 CCDC162PA2VCL2 907 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 VAPBO95292 243 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 AIF1P55008 147 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 IQSEC1Q6DN90 963 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ZNF75CPQ92670 426 aaPredicted RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 MFN2O95140 757 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 NEDD8Q15843 81 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ZSWIM7Q19AV6 140 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 OMA1Q96E52 524 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 PDCD10Q9BUL8 212 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 MYH7BA7E2Y1 1941 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 LINC00854A0A1B0GVQ3 168 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 MGAT1P26572 445 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 FAUP35544 74 aaKnown RBP16.81■□□□□ 0.28
PDZD8-201ENST00000334464 SLC2A14Q8TDB8 520 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 WNT8BQ93098 351 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 RWDD3Q9Y3V2 267 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 NDUFS2O75306 463 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 DPEP1P16444 411 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 SAMD7Q7Z3H4 446 aa16.81■□□□□ 0.28
PDZD8-201ENST00000334464 ICE1Q9Y2F5 2266 aa16.8■□□□□ 0.28
PDZD8-201ENST00000334464 S100A9P06702 114 aaKnown RBP16.8■□□□□ 0.28
PDZD8-201ENST00000334464 YBX3P16989 372 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■□□□□ 9.9
PDZD8-201ENST00000334464 ACTR3P61158 418 aa16.8■□□□□ 0.28
PDZD8-201ENST00000334464 MTAPQ13126 283 aa16.8■□□□□ 0.28
PDZD8-201ENST00000334464 NAIF1Q69YI7 327 aaPredicted RBP16.8■□□□□ 0.28
PDZD8-201ENST00000334464 HJURPQ8NCD3 748 aaPredicted RBP16.8■□□□□ 0.28
PDZD8-201ENST00000334464 PJA1Q8NG27 643 aa16.8■□□□□ 0.28
PDZD8-201ENST00000334464 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
PDZD8-201ENST00000334464 ALOX12P18054 663 aa16.8■□□□□ 0.28
PDZD8-201ENST00000334464 ORC1Q13415 861 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms