RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ERVK-5Q9HDB9 667 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 PHTF1Q9UMS5 762 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 SOX13Q9UN79 622 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 MGAT4DA6NG13 374 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 YJEFN3A6XGL0 299 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 E7ENQ6 273 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 SOD2P04179 222 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 SP100P23497 879 aaPredicted RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 FBXW4P57775 412 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 MAXP61244 160 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 AP1S1P61966 158 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 MAD2L1Q13257 205 aaPredicted RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 AUHQ13825 339 aaKnown RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 PDCD2Q16342 344 aaPredicted RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 RARS2Q5T160 578 aaKnown RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 STXBP5Q5T5C0 1151 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 N4BP2L1Q5TBK1 243 aaPredicted RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 TMEM110Q86TL2 294 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 NAT16Q8N8M0 369 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 STAG3L4Q8TBR4 150 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 EXOC2Q96KP1 924 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 COPS8Q99627 209 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 C10orf88Q9H8K7 445 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 TLR9Q9NR96 1032 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 POLG2Q9UHN1 485 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 BCLAF3A2AJT9 711 aaKnown RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 IRAK2O43187 625 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 SERPINE1P05121 402 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 ABL2P42684 1182 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 MSLNQ13421 630 aaPredicted RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 HNRNPDQ14103 355 aaKnown RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 PLD5Q8N7P1 536 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 RTL3Q8N8U3 475 aaKnown RBP11.36□□□□□ -0.59
POLR1B-202ENST00000333990 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 MYO19Q96H55 970 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 KCTD5Q9NXV2 234 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 FBXW11Q9UKB1 542 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
POLR1B-202ENST00000333990 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 NDST3O95803 873 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 ASLP04424 464 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 IQCF3P0C7M6 154 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 ELFN1P0C7U0 828 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 EPB42P16452 691 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 FMO4P31512 558 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PBX3P40426 434 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 MAGEA11P43364 429 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PEX5P50542 639 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 SKOR1P84550 965 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CYP2A13Q16696 494 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 TMEM63BQ5T3F8 832 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 DOK6Q6PKX4 331 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CHST9Q7L1S5 443 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 RASGEF1CQ8N431 466 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 SEC16BQ96JE7 1060 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 BTN3A1O00481 513 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CCNT2O60583 730 aaKnown RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 ANXA5P08758 320 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CDKN2BP42772 138 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PFKPQ01813 784 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CRY1Q16526 586 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 ACMSDQ8TDX5 336 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 HDAC7Q8WUI4 952 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 VRTNQ9H8Y1 702 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 ARHGEF4Q9NR80 690 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 HECAQ9UBI9 543 aaPredicted RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 TLR6Q9Y2C9 796 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 A8MX80 341 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CACNB4O00305 520 aaPredicted RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 FGF18O76093 207 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CAP1Q01518 475 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 DUPD1Q68J44 220 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 MTSS1LQ765P7 747 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 MDM1Q8TC05 714 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 SPATA17Q96L03 361 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 NOP53Q9NZM5 478 aaKnown RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 VTI1BQ9UEU0 232 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 FBXO5Q9UKT4 447 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CRYL1Q9Y2S2 319 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 THRAP10827 490 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CHRNB2P17787 502 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 CDH2P19022 906 aaPredicted RBP11.35□□□□□ -0.59
POLR1B-202ENST00000333990 TPSB2P20231 275 aa11.35□□□□□ -0.59
POLR1B-202ENST00000333990 EEF1B2P24534 225 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms