RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PSMC3P17980 439 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 MTA1Q13330 715 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 TCEA2Q15560 299 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 C16orf96A6NNT2 1141 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 CYP2A7P20853 494 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 PRKAA2P54646 552 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 CIR1Q86X95 450 aaPredicted RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
VSTM4-202ENST00000332853 SAR1AQ9NR31 198 aa13.16□□□□□ -0.3
VSTM4-202ENST00000332853 C2CD4BA6NLJ0 364 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 MAPK1P28482 360 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ARL4DP49703 201 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 IL2P60568 153 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 BTRCQ9Y297 605 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 COQ4Q9Y3A0 265 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 INPP4BO15327 924 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 FKBP6O75344 327 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 FGFR3P22607 806 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 WNT3AP56704 352 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 TRAF2Q12933 501 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 USP4Q13107 963 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 PWP1Q13610 501 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ZC3H12BQ5HYM0 836 aaKnown RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF513Q8N8E2 541 aaPredicted RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 SH3BP4Q9P0V3 963 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 POLG2Q9UHN1 485 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 SNX8Q9Y5X2 465 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 F8W810 466 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 PPEF2O14830 753 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 GPC1P35052 558 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ALDH9A1P49189 494 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 NRLP54845 237 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 NOGQ13253 232 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 INTS6LQ5JSJ4 861 aaKnown RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 MON1AQ86VX9 555 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 PLK2Q9NYY3 685 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 XPR1Q9UBH6 696 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 FKTNO75072 461 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 SERPINA4P29622 427 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ZBTB49Q6ZSB9 765 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 GRHL1Q9NZI5 618 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 MTA2O94776 668 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 UNC5CO95185 931 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 TSHRP16473 764 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 DYNC1I2Q13409 638 aaKnown RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 CCDC85BQ15834 202 aaPredicted RBP13.15□□□□□ -0.3
VSTM4-202ENST00000332853 PPM1JQ5JR12 505 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 STXBP5Q5T5C0 1151 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 FAM45BPQ6NSW5 357 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 LRRC74BQ6ZQY2 392 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 ADAM28Q9UKQ2 775 aa13.15□□□□□ -0.3
VSTM4-202ENST00000332853 HCRTO43612 131 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 HLA-DPA1P20036 260 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CCDC15Q0P6D6 951 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 RNASEH2BQ5TBB1 312 aaKnown RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ARMC6Q6NXE6 501 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 MAB21L3Q8N8X9 362 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 SPATA22Q8NHS9 363 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ACE2Q9BYF1 805 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 GIMAP4Q9NUV9 329 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ARL15Q9NXU5 204 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 E9PAM4 449 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TYMPP19971 482 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 EPHA3P29320 983 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PSEN1P49768 467 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PRKCZQ05513 592 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 HSPA14Q0VDF9 509 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 RHBDF2Q6PJF5 856 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 OR6Y1Q8NGX8 325 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 SIKE1Q9BRV8 207 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms