RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 ALFQ53S48 1182 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 TMEM173Q86WV6 379 aaPredicted RBP13.85□□□□□ -0.19
SRPRA-201ENST00000332118 LMNTD2Q8IXW0 634 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 SPATA22Q8NHS9 363 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 SCG3Q8WXD2 468 aaKnown RBP13.85□□□□□ -0.19
SRPRA-201ENST00000332118 HMCESQ96FZ2 354 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.19
SRPRA-201ENST00000332118 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
SRPRA-201ENST00000332118 WDR91A4D1P6 747 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 F5H423 210 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 ZNF195O14628 629 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PRAMEF11O60813 436 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 SNUPNO95149 360 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 GABRB3P28472 473 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 VEGFBP49765 207 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 RASSF2P50749 326 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TAF1BQ53T94 588 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PLD4Q96BZ4 506 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 VPS39Q96JC1 886 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 ZNF778Q96MU6 729 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 RAB3IPQ96QF0 476 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 UNC93B1Q9H1C4 597 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 MPP6Q9NZW5 540 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 ZNF106Q9H2Y7 1883 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 LATS1O95835 1130 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PPP3CCP48454 512 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 SDHAF4Q5VUM1 108 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TPGS2Q68CL5 300 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TAS1R1Q7RTX1 841 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 KLHL29Q96CT2 875 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 HERC2P3Q9BVR0 1158 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TMEM216Q9P0N5 145 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 AFF4Q9UHB7 1163 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 HMGA1P17096 107 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PBX3P40426 434 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TUFMP49411 452 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 STX3Q13277 289 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 IHHQ14623 411 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 PSMD5Q16401 504 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 MTDHQ86UE4 582 aaKnown RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 FAM167BQ9BTA0 163 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 C20orf96Q9NUD7 363 aaPredicted RBP13.84□□□□□ -0.19
SRPRA-201ENST00000332118 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 MID2Q9UJV3 735 aa13.84□□□□□ -0.19
SRPRA-201ENST00000332118 DENND4CQ5VZ89 1909 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 GFRA2O00451 464 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CNTN5O94779 1100 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 KRT16P08779 473 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 ATXN1LP0C7T5 689 aaKnown RBP13.83□□□□□ -0.2
SRPRA-201ENST00000332118 MYL4P12829 197 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 PTPN4P29074 926 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 NUMBP49757 651 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 MNAT1P51948 309 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 HSP90AA5PQ58FG0 334 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 TMCO4Q5TGY1 634 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CES3Q6UWW8 571 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CHST9Q7L1S5 443 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 PGBD5Q8N414 524 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 WWP1Q9H0M0 922 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 TBX21Q9UL17 535 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 HEATR9A2RTY3 570 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 SBK3P0C264 359 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 TYK2P29597 1187 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
SRPRA-201ENST00000332118 EFEMP1Q12805 493 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 OVGP1Q12889 678 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 RFTN1Q14699 578 aaPredicted RBP13.83□□□□□ -0.2
SRPRA-201ENST00000332118 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 SLC39A5Q6ZMH5 540 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 ATG14Q6ZNE5 492 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CRLF3Q8IUI8 442 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 IGSF21Q96ID5 467 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 GPR78Q96P69 363 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 PGLYRP2Q96PD5 576 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 FICDQ9BVA6 458 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 CCDC106Q9BWC9 280 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 MMADHCQ9H3L0 296 aaPredicted RBP13.83□□□□□ -0.2
SRPRA-201ENST00000332118 HEY2Q9UBP5 337 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
SRPRA-201ENST00000332118 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
SRPRA-201ENST00000332118 TOP3BO95985 862 aaKnown RBP13.82□□□□□ -0.2
SRPRA-201ENST00000332118 CPB1P15086 417 aa13.82□□□□□ -0.2
SRPRA-201ENST00000332118 PAMP19021 973 aa13.82□□□□□ -0.2
SRPRA-201ENST00000332118 TACR2P21452 398 aa13.82□□□□□ -0.2
SRPRA-201ENST00000332118 CALB2P22676 271 aa13.82□□□□□ -0.2
SRPRA-201ENST00000332118 DSG1Q02413 1049 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms