RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ETFBKMTQ8IXQ9 262 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 KLHDC8BQ8IXV7 354 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 MAFAQ8NHW3 353 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 HTR3CQ8WXA8 447 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 RSAD2Q8WXG1 361 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ISG20Q96AZ6 181 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC114Q96M63 670 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 LRRC3BQ96PB8 259 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ZNF317Q96PQ6 595 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 IL12RB2Q99665 862 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 FEM1AQ9BSK4 669 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 APOL5Q9BWW9 433 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 BBS2Q9BXC9 721 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 FOXP3Q9BZS1 431 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CEP44Q9C0F1 390 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SLC39A8Q9C0K1 460 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 USP29Q9HBJ7 922 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ETNK2Q9NVF9 386 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 MPP6Q9NZW5 540 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 PAK5Q9P286 719 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SNX10Q9Y5X0 201 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 PRUNE2Q8WUY3 3088 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ERI2A8K979 691 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 H7C0C1 242 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 AP3B1O00203 1094 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ARNTLO00327 626 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ACSL3O95573 720 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SRPRAP08240 638 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 TYRP14679 529 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 PECAM1P16284 738 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 FDFT1P37268 417 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ATP5OP48047 213 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CDK16Q00536 496 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 GBE1Q04446 702 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 NSUN2Q08J23 767 aaKnown RBP eCLIP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 LY6G5CQ5SRR4 150 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ICE2Q659A1 982 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ALG1LQ6GMV1 187 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ADHFE1Q8IWW8 467 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC197Q8NCU1 140 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ALG14Q96F25 216 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 MAGEB5Q9BZ81 275 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SMG9Q9H0W8 520 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 IPO11Q9UI26 975 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 DNPEPQ9ULA0 475 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 HEY1Q9Y5J3 304 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 NUP205Q92621 2012 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 C19orf67A6NJJ6 358 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 H3BQ06 376 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 MAFKO60675 156 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 CISD3P0C7P0 127 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 HNRNPH1P31943 449 aaKnown RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 MAGEA6P43360 314 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 MAPK8P45983 427 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 PAPOLAP51003 745 aaKnown RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 PARM1Q6UWI2 310 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 RALGPS2Q86X27 583 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 TMEM25Q86YD3 366 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 NPWQ8N729 165 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 RIN3Q8TB24 985 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 PHACTR1Q9C0D0 580 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 LINC00597Q9H2U6 94 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 R3HDM2Q9Y2K5 976 aaKnown RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 C2CD4DB7Z1M9 353 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 IVDP26440 423 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 TNFRSF4P43489 277 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 ITGA8P53708 1063 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 DYNLT1P63172 113 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 LONRF1Q17RB8 773 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 PLEKHG6Q3KR16 790 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 TEX44Q53QW1 395 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 GRAMD4Q6IC98 578 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 SPATA13Q96N96 652 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 SERPINB12Q96P63 405 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 NSRP1Q9H0G5 558 aaKnown RBP9.66□□□□□ -0.86
C11orf54-201ENST00000331239 PDFQ9HBH1 243 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 HPS4Q9NQG7 708 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 ABCB8Q9NUT2 735 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 THEGQ9P2T0 379 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 STARD13Q9Y3M8 1113 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 NUMBLQ9Y6R0 609 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 COL4A2P08572 1712 aa9.66□□□□□ -0.86
C11orf54-201ENST00000331239 TSPAN3O60637 253 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 ZMPSTE24O75844 475 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 ATP5BP06576 529 aaKnown RBP9.65□□□□□ -0.86
C11orf54-201ENST00000331239 PABPC1P11940 636 aaKnown RBP9.65□□□□□ -0.86
C11orf54-201ENST00000331239 ATP5DP30049 168 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 GRM3Q14832 879 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 TRIP13Q15645 432 aaPredicted RBP9.65□□□□□ -0.86
C11orf54-201ENST00000331239 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 PARP6Q2NL67 630 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 HSF5Q4G112 596 aaPredicted RBP9.65□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC38Q502W7 563 aa9.65□□□□□ -0.86
C11orf54-201ENST00000331239 RNF219Q5W0B1 726 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms