RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 GET4Q7L5D6 327 aaPredicted RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 FAM35AQ86V20 835 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CIR1Q86X95 450 aaPredicted RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 PCDHB18PQ96TA0 734 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 KLHL4Q9C0H6 718 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 IL22Q9GZX6 179 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 COMMD8Q9NX08 183 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 SESN1Q9Y6P5 492 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 FAM237BA0A1B0GVD1 139 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 SLCO1B7G3V0H7 640 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 GSNP06396 782 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FGD3Q5JSP0 725 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ZBTB49Q6ZSB9 765 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 KCTD4Q8WVF5 259 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 GMIPQ9P107 970 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 A0A087X1B8 175 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 TMEM88BA6NKF7 163 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PAGE1O75459 146 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 NTRK1P04629 796 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ASGR1P07306 291 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 MRPS5P82675 430 aaKnown RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 NOGQ13253 232 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 LENG9Q96B70 501 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 RMI1Q9H9A7 625 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 MRGBPQ9NV56 204 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 A0A1B0GW55 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FGF10O15520 208 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 MSCO60682 206 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L2P0CJ85 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L3P0CJ86 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L4P0CJ87 422 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L5P0CJ88 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L6P0CJ89 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4L7P0CJ90 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 KRT20P35900 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 NDUFV1P49821 464 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 TRIP4Q15650 581 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 ARHGAP17Q68EM7 881 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 SIX5Q8N196 739 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ATAD1Q8NBU5 361 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 RNF145Q96MT1 663 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CDRT15Q96T59 188 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 VPS45Q9NRW7 570 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUX4Q9UBX2 424 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CROTQ9UKG9 612 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ATRNO75882 1429 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CHADO15335 359 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 HNRNPRO43390 633 aaKnown RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 PROCP04070 461 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 MYBL2P10244 700 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PTPN3P26045 913 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 THOP1P52888 689 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PCID2Q5JVF3 399 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 SYT12Q8IV01 421 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 GPR156Q8NFN8 814 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CERS2Q96G23 380 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 DUSP16Q9BY84 665 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 RSPH9Q9H1X1 276 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 ANKRD6Q9Y2G4 727 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PEX11AO75192 247 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 NDUFS2O75306 463 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PTPN4P29074 926 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 GRM5P41594 1212 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ANXA11P50995 505 aaKnown RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 CCDC149Q6ZUS6 474 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 ANKS1BQ7Z6G8 1248 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CYP4Z1Q86W10 505 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 MFSD14AQ96MC6 490 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CPXM1Q96SM3 734 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 PCDH12Q9NPG4 1184 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PRKAG3Q9UGI9 489 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 hCG_1818297A0A087WSY0 165 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PRKCIP41743 596 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 GPR15P49685 360 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 OASLQ15646 514 aaKnown RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 CYP4X1Q8N118 509 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PRELID2Q8N945 189 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 SHC3Q92529 594 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 FCRL2Q96LA5 508 aaPredicted RBP10.29□□□□□ -0.76
CHD3-201ENST00000330494 TMEM245Q9H330 911 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
CHD3-201ENST00000330494 CCR4P51679 360 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 NAGLUP54802 743 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 LINGO4Q6UY18 593 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 NANOGNBQ7Z5D8 188 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 DSG4Q86SJ6 1040 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 ING5Q8WYH8 240 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 TRIM8Q9BZR9 551 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 ZCCHC2Q9C0B9 1178 aaKnown RBP10.28□□□□□ -0.76
CHD3-201ENST00000330494 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 SCAMP1O15126 338 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 FAM155BO75949 473 aa10.28□□□□□ -0.76
CHD3-201ENST00000330494 GRIK3Q13003 919 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms