RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 LDOC1O95751 146 aaPredicted RBP13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 GPD1P21695 349 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 HNRNPA2B1P22626 353 aaKnown RBP13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 MAT2AP31153 395 aaKnown RBP13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 L1CAMP32004 1257 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 POM121L1PQ3SYA9 428 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 TMEM259Q4ZIN3 620 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 RAB6CQ53S08 254 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 KIAA1161Q6NSJ0 714 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 WDR59Q6PJI9 974 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 TMPRSS12Q86WS5 348 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 GATAD2AQ86YP4 633 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 FAM172AQ8WUF8 416 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 TSC1Q92574 1164 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 IFT43Q96FT9 208 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 KLHDC7BQ96G42 594 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 AGPAT1Q99943 283 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 BPIFA3Q9BQP9 254 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 RAB6CQ9H0N0 254 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 NDFIP2Q9NV92 336 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 ANKRD36A6QL64 1941 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 DSPP15924 2871 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ZFYVE26Q68DK2 2539 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 A0A1W2PQU0 124 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FAM72CH0Y354 149 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 RNF103O00237 685 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 TAF4O00268 1085 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 GSRP00390 522 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 PLEKP08567 350 aaPredicted RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ADRB3P13945 408 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FERP16591 822 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 AKT2P31751 481 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CCNHP51946 323 aaPredicted RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ZNF143P52747 638 aaPredicted RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ILKQ13418 452 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 PRAMEF14Q5SWL7 426 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FAM72AQ5TYM5 149 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FAM72DQ6L9T8 149 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ABI3BPQ7Z7G0 1075 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 SLFN11Q7Z7L1 901 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FAM72BQ86X60 149 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 DRC7Q8IY82 874 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CCDC185Q8N715 623 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 GRIN3AQ8TCU5 1115 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CASKIN2Q8WXE0 1202 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 RAB7BQ96AH8 199 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 SYT11Q9BT88 431 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 TNKS2Q9H2K2 1166 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 CCDC86Q9H6F5 360 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 ZFR2Q9UPR6 939 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 HS3ST3A1Q9Y663 406 aa13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 URB1O60287 2271 aaKnown RBP13.83□□□□□ -0.2
GTF3C6-201ENST00000329970 FAM170AA1A519 330 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 KDELR3O43731 214 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 RAMP2O60895 175 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 RFPL3O75679 317 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 THEGLP0DJG4 465 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 HTR7P34969 479 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 ACVRL1P37023 503 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 ACADVLP49748 655 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 SNRPD1P62314 119 aaKnown RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 RPS21P63220 83 aaKnown RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 TYRO3Q06418 890 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 BNIP3Q12983 259 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 POLD3Q15054 466 aaPredicted RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 RWDD4Q6NW29 188 aaKnown RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 CACTIN-AS1Q8N1I8 211 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 RTL3Q8N8U3 475 aaKnown RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 OR2AP1Q8NGE2 309 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 ASB12Q8WXK4 309 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 OSBPL1AQ9BXW6 950 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 KLHL11Q9NVR0 708 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 DNAI1Q9UI46 699 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 FADS3Q9Y5Q0 445 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 CELSR3Q9NYQ7 3312 aa13.82□□□□□ -0.2
GTF3C6-201ENST00000329970 ANKRD62A6NC57 917 aa13.81□□□□□ -0.2
GTF3C6-201ENST00000329970 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
GTF3C6-201ENST00000329970 SLC31A1O15431 190 aa13.81□□□□□ -0.2
GTF3C6-201ENST00000329970 CCP110O43303 1012 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms