RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TRPC5OSA6NMA1 111 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 E7ENX8 843 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 GOLGA8TH3BQL2 631 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 SDHDO14521 159 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 COL6A2P12110 1019 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSH1-201ENST00000326470 CYP2B6P20813 491 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 SAT1P21673 171 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 IGBP1P78318 339 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 OTUD1Q5VV17 481 aaPredicted RBP16.96■□□□□ 0.31
SSH1-201ENST00000326470 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
SSH1-201ENST00000326470 CENPLQ8N0S6 344 aaPredicted RBP16.96■□□□□ 0.31
SSH1-201ENST00000326470 MYO1HQ8N1T3 1032 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 PELI3Q8N2H9 469 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 SLCO4A1Q96BD0 722 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 SARDHQ9UL12 918 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 MAGED2Q9UNF1 606 aaPredicted RBP16.96■□□□□ 0.31
SSH1-201ENST00000326470 EVPLQ92817 2033 aa16.96■□□□□ 0.31
SSH1-201ENST00000326470 FAM155AB1AL88 458 aaPredicted RBP16.96■□□□□ 0.3
SSH1-201ENST00000326470 EEF2KO00418 725 aaKnown RBP16.96■□□□□ 0.3
SSH1-201ENST00000326470 TRIM24O15164 1050 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 HCRTO43612 131 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 SLC7A1P30825 629 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 NDST2P52849 883 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 STX5Q13190 355 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 MTX3Q5HYI7 312 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 LRRC8EQ6NSJ5 796 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 ZNF554Q86TJ5 538 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 BBS5Q8N3I7 341 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 MLPHQ9BV36 600 aaPredicted RBP16.96■□□□□ 0.3
SSH1-201ENST00000326470 ANKRD60Q9BZ19 345 aa16.96■□□□□ 0.3
SSH1-201ENST00000326470 SCN1AP35498 2009 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 TCRBV3S1A0A5B6 114 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 TMEM233B4DJY2 109 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 SOCS7O14512 581 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 ZBTB24O43167 697 aaPredicted RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 NPHS1O60500 1241 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 NELFEP18615 380 aaKnown RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 NMBRP28336 390 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 PGGT1BP53609 377 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 PITX1P78337 314 aaPredicted RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 PDAP1Q13442 181 aaKnown RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 LRP8Q14114 963 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 DCAF6Q58WW2 860 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 SH3D19Q5HYK7 790 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 RIN3Q8TB24 985 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 HSPBAP1Q96EW2 488 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 RRN3Q9NYV6 651 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 XPR1Q9UBH6 696 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 SNX13Q9Y5W8 968 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 HTRA2O43464 458 aaPredicted RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 BMP10O95393 424 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 FGFR3P22607 806 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CD68P34810 354 aaPredicted RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 AVPR1AP37288 418 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 DGKDQ16760 1214 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CHSY3Q70JA7 882 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 BNIPLQ7Z465 357 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CCNYL1Q8N7R7 359 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 FAM149B1Q96BN6 582 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 RANBP9Q96S59 729 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 APBA2Q99767 749 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 GBA3Q9H227 469 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CXCL16Q9H2A7 254 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 MRGBPQ9NV56 204 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 CACNA2D2Q9NY47 1150 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 ZNHIT2Q9UHR6 403 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
SSH1-201ENST00000326470 HEMK1Q9Y5R4 338 aaPredicted RBP16.95■□□□□ 0.3
SSH1-201ENST00000326470 HEATR9A2RTY3 570 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 MAGEB3O15480 346 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 TSPAN1O60635 241 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 DAB1O75553 588 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 HNRNPCP07910 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSH1-201ENST00000326470 GRM5P41594 1212 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 NUP107P57740 925 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 MAPRE2Q15555 327 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 TSTD2Q5T7W7 516 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 PDZD4Q76G19 769 aaPredicted RBP16.94■□□□□ 0.3
SSH1-201ENST00000326470 CRYBG2Q8N1P7 616 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 FIBCD1Q8N539 461 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 NT5C3BQ969T7 300 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 GPR78Q96P69 363 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 APOL2Q9BQE5 337 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 VPS45Q9NRW7 570 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 FAF1Q9UNN5 650 aaPredicted RBP16.94■□□□□ 0.3
SSH1-201ENST00000326470 AKT3Q9Y243 479 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 ACOT9Q9Y305 439 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 SYNJ2BP-COX16A0A087WUM0 186 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 PRORSD1PA6NEY8 169 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 FZD9O00144 591 aa16.94■□□□□ 0.3
SSH1-201ENST00000326470 PDGFRBP09619 1106 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms