RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 LRSAM1Q6UWE0 723 aa8.29□□□□□ -1.08
CCNC-201ENST00000326298 PARS2Q7L3T8 475 aaKnown RBP8.29□□□□□ -1.08
CCNC-201ENST00000326298 HNRNPLLQ8WVV9 542 aaKnown RBP8.29□□□□□ -1.08
CCNC-201ENST00000326298 CENPIQ92674 756 aaPredicted RBP8.29□□□□□ -1.08
CCNC-201ENST00000326298 BMFQ96LC9 184 aa8.29□□□□□ -1.08
CCNC-201ENST00000326298 CCDC86Q9H6F5 360 aaKnown RBP8.29□□□□□ -1.08
CCNC-201ENST00000326298 RRN3Q9NYV6 651 aa8.29□□□□□ -1.08
CCNC-201ENST00000326298 IL36AQ9UHA7 158 aa8.29□□□□□ -1.08
CCNC-201ENST00000326298 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
CCNC-201ENST00000326298 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
CCNC-201ENST00000326298 COL5A1P20908 1838 aaPredicted RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 ILVBLA1L0T0 632 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 ALOX15BO15296 676 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 PAK4O96013 591 aaPredicted RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 THEGLP0DJG4 465 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 RXRGP48443 463 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 OXCT1P55809 520 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 KRT83P78385 493 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 FAM46CQ5VWP2 391 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 RWDD4Q6NW29 188 aaKnown RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 LRRC31Q6UY01 552 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 ERN2Q76MJ5 926 aaKnown RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 MON1BQ7L1V2 547 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 PRPF39Q86UA1 669 aaKnown RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 HORMAD1Q86X24 394 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 TMIEQ8NEW7 156 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 FAM172AQ8WUF8 416 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 ARHGEF2Q92974 986 aaKnown RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 BBC3Q96PG8 261 aaPredicted RBP8.28□□□□□ -1.08
CCNC-201ENST00000326298 TRIM7Q9C029 511 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
CCNC-201ENST00000326298 LY6G6EA0A0G2JKS1 128 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 C1QTNF3-AMACRE9PGA6 284 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 FFAR2O15552 330 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 SLC7A4O43246 635 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 CCP110O43303 1012 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 ATMINO43313 823 aaPredicted RBP8.27□□□□□ -1.08
CCNC-201ENST00000326298 PCDH8O95206 1070 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 LDOC1O95751 146 aaPredicted RBP8.27□□□□□ -1.08
CCNC-201ENST00000326298 PLEKP08567 350 aaPredicted RBP8.27□□□□□ -1.08
CCNC-201ENST00000326298 ADRB3P13945 408 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 DGKAP23743 735 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 STAT4Q14765 748 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 ARCQ7LC44 396 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 DSG4Q86SJ6 1040 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 ARFGAP1Q8N6T3 406 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 KLF6Q99612 283 aaPredicted RBP8.27□□□□□ -1.08
CCNC-201ENST00000326298 SYT11Q9BT88 431 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 CALN1Q9BXU9 219 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 ZDHHC6Q9H6R6 413 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 PREBQ9HCU5 417 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 GPATCH2LQ9NWQ4 482 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 ADAM22Q9P0K1 906 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 LIMA1Q9UHB6 759 aaKnown RBP8.27□□□□□ -1.08
CCNC-201ENST00000326298 FADS3Q9Y5Q0 445 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 U3KQA8 63 aa8.27□□□□□ -1.08
CCNC-201ENST00000326298 LGALS16A8MUM7 142 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 PRAMEF26H0Y7S4 382 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 INSIG1O15503 277 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 KRT3P12035 628 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 SDC4P31431 198 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 PTPN9P43378 593 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 SNX16P57768 344 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 SEMG2Q02383 582 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 UBXN1Q04323 297 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 TARDBPQ13148 414 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCNC-201ENST00000326298 CA9Q16790 459 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 SETMARQ53H47 684 aaPredicted RBP8.27□□□□□ -1.09
CCNC-201ENST00000326298 CARD16Q5EG05 197 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 PPP1R15BQ5SWA1 713 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 KCTD16Q68DU8 428 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 TP53INP2Q8IXH6 220 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 KLHDC7BQ96G42 594 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 EXOC2Q96KP1 924 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 NSMCE3Q96MG7 304 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 HDAC8Q9BY41 377 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 TCEAL2Q9H3H9 227 aaPredicted RBP8.27□□□□□ -1.09
CCNC-201ENST00000326298 ERVMER34-1Q9H9K5 563 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 TMEM248Q9NWD8 314 aa8.27□□□□□ -1.09
CCNC-201ENST00000326298 HECAQ9UBI9 543 aaPredicted RBP8.27□□□□□ -1.09
CCNC-201ENST00000326298 PPARGC1AQ9UBK2 798 aaKnown RBP8.27□□□□□ -1.09
CCNC-201ENST00000326298 PIEZO2Q9H5I5 2752 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 IGLON5A6NGN9 336 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 TLX3O43711 291 aaPredicted RBP8.26□□□□□ -1.09
CCNC-201ENST00000326298 UGT2B4P06133 528 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 ITPKBP27987 946 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 STAT1P42224 750 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 ARRB1P49407 418 aaPredicted RBP8.26□□□□□ -1.09
CCNC-201ENST00000326298 SFSWAPQ12872 951 aaKnown RBP8.26□□□□□ -1.09
CCNC-201ENST00000326298 FZD2Q14332 565 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 HES3Q5TGS1 186 aa8.26□□□□□ -1.09
CCNC-201ENST00000326298 Q6ZSR6 202 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms