RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 OBP2AQ9NY56 170 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TRANK1O15050 2925 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 DENND4AQ7Z401 1863 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 SHROOM3Q8TF72 1996 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 KIF26AQ9ULI4 1882 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 PRAMEF11O60813 436 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 TBX10O75333 385 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 PPFIA2O75334 1257 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 TPSB2P20231 275 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 HOXD9P28356 352 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 ETFBP38117 255 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 BASP1P80723 227 aaKnown RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 TPSAB1Q15661 275 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 ANKRD22Q5VYY1 191 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 SLC30A9Q6PML9 568 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 TMC3Q7Z5M5 1100 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 KLHDC8BQ8IXV7 354 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 TEX26Q8N6G2 289 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 DRAXINQ8NBI3 349 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 SMARCD2Q92925 531 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 STMN4Q9H169 189 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 GBA3Q9H227 469 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 PDFQ9HBH1 243 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
DDX39A-202ENST00000324340 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 BAIAP2L1Q9UHR4 511 aa12.98□□□□□ -0.33
DDX39A-202ENST00000324340 A0A0D9SEW6 157 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 J3KR12 359 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 KDELR3O43731 214 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 TMEM63AO94886 807 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 JCHAINP01591 159 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 RHOCP08134 193 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 CD68P34810 354 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 LTBRP36941 435 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ACVRL1P37023 503 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 HSD17B3P37058 310 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 SKIV2L2P42285 1042 aaKnown RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 IFNAR2P48551 515 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 RENBPP51606 427 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 MRPS35P82673 323 aaKnown RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 DLX2Q07687 328 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 FAM78AQ5JUQ0 283 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 CEP128Q6ZU80 1094 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 MCUQ8NE86 351 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 FIBINQ8TAL6 211 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 DDI1Q8WTU0 396 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 RSPRY1Q96DX4 576 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ALG14Q96F25 216 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 MSLNLQ96KJ4 702 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 LRRC3BQ96PB8 259 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 APOL5Q9BWW9 433 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 FRMD8Q9BZ67 464 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 CDH7Q9ULB5 785 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 RPL26L1Q9UNX3 145 aaKnown RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 OR51B4Q9Y5P0 310 aa12.97□□□□□ -0.33
DDX39A-202ENST00000324340 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
DDX39A-202ENST00000324340 CXorf51AA0A1B0GTR3 108 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 H0Y626 953 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 CYBBP04839 570 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 NQO1P15559 274 aaKnown RBP12.96□□□□□ -0.33
DDX39A-202ENST00000324340 FCARP24071 287 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 PSMB4P28070 264 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 PLK1P53350 603 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 OXCT1P55809 520 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 CDK16Q00536 496 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
DDX39A-202ENST00000324340 FSCBQ5H9T9 825 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 FAM182AQ5T1J6 154 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 RNF219Q5W0B1 726 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-202ENST00000324340 CES5AQ6NT32 575 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 PPP1R21Q6ZMI0 780 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 GET4Q7L5D6 327 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-202ENST00000324340 ADGRG2Q8IZP9 1017 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 OR7D4Q8NG98 312 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 IRF7Q92985 503 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 PABPC5Q96DU9 382 aaKnown RBP12.96□□□□□ -0.33
DDX39A-202ENST00000324340 STAMBPL1Q96FJ0 436 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 PGM2Q96G03 612 aa12.96□□□□□ -0.33
DDX39A-202ENST00000324340 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms