RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 SLC22A9Q8IVM8 553 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SLC4A11Q8NBS3 891 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PRELID1Q9Y255 219 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 LYPLA1O75608 230 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 COX4I1P13073 169 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 FDPSP14324 419 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 EPORP19235 508 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TGFBR2P37173 567 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 FBXO39Q8N4B4 442 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 COX4I2Q96KJ9 171 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SP140LQ9H930 580 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 NEUROD4Q9HD90 331 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TMEM150BA6NC51 233 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CAMTA2O94983 1202 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 NPR3P17342 541 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 OR1E1P30953 314 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 STAT5AP42229 794 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CD151P48509 253 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SQLEQ14534 574 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PITRM1Q5JRX3 1037 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 LGI2Q8N0V4 545 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ZHX1-C8orf76Q96EF9 292 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ZDHHC6Q9H6R6 413 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RBM22Q9NW64 420 aaKnown RBP eCLIP7.99□□□□□ -1.13
CIITA-201ENST00000324288 SNTG2Q9NY99 539 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CCDC189A1A4V9 331 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 VAPBO95292 243 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ARP10275 920 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PNPLA4P41247 253 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 NPTX2P47972 431 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BCAT1P54687 386 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TIGD7Q6NT04 549 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 AMER2Q8N7J2 671 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 DNAJC1Q96KC8 554 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 GLT1D1Q96MS3 346 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 UGT2B28Q9BY64 529 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 DEFB129Q9H1M3 183 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 GTF3C4Q9UKN8 822 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RAB21Q9UL25 225 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BICRAQ9NZM4 1560 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RPN2P04844 631 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 COX7A2P14406 83 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CRATP43155 626 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 OMPP47874 163 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TPGS1Q6ZTW0 290 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TRAPPC5Q8IUR0 188 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CKAP2Q8WWK9 683 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PWWP2AQ96N64 755 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TCF12Q99081 682 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PLCL2Q9UPR0 1127 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BTRCQ9Y297 605 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PDE2AO00408 941 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 GPR15P49685 360 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CXorf57Q6NSI4 855 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 NPNTQ6UXI9 565 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 KLHL28Q9NXS3 571 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 DHRS7Q9Y394 339 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 AP4B1Q9Y6B7 739 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 GAKO14976 1311 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 C19orf81C9J6K1 198 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TIPRLO75663 272 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 MPOP05164 745 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SPIBQ01892 262 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 DHDDSQ86SQ9 333 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 HGH1Q9BTY7 390 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 PFDN2Q9UHV9 154 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 UBQLN1Q9UMX0 589 aaKnown RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 SNX7Q9UNH6 387 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 HAT1O14929 419 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FCGRTP55899 365 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 C4orf22Q6V702 233 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EMILIN2Q9BXX0 1053 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TPK1Q9H3S4 243 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 MALT1Q9UDY8 824 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 NR1H2P55055 460 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 COPZ1P61923 177 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 C7orf57Q8NEG2 295 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 NLNQ9BYT8 704 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FBXO6Q9NRD1 293 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 TMLHEQ9NVH6 421 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EGFL7Q9UHF1 273 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ZSCAN5BA6NJL1 495 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TMEM114B3SHH9 223 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FFAR3O14843 346 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 GPR42O15529 346 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 RTN3O95197 1032 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 ANXA6P08133 673 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 RPL14P50914 215 aaKnown RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 TCEAL5Q5H9L2 206 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 UBE2J2Q8N2K1 259 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ZNF366Q8N895 744 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CDYL2Q8N8U2 506 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 METTL6Q8TCB7 284 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TATDN2Q93075 761 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EMID1Q96A84 441 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 TRPM5Q9NZQ8 1165 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 MLXQ9UH92 298 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FOXO6A8MYZ6 492 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 KPNA3O00505 521 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms