RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 COL6A2P12110 1019 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 HIST1H2ADP20671 130 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF132P52740 706 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ATXN1P54253 815 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 TAF1CQ15572 869 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 NDRG1Q92597 394 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 HIST1H2AHQ96KK5 128 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 HIST1H2AJQ99878 128 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 H2AFJQ9BTM1 129 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ACSS2Q9NR19 701 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 GNEQ9Y223 722 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 EIF3LQ9Y262 564 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ADM5C9JUS6 153 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 MYO1DO94832 1006 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 AQP4P55087 323 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 PGAM4Q8N0Y7 254 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 APOL5Q9BWW9 433 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 MUC3BQ9H195 1237 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 NXF3Q9H4D5 531 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 TAS2R13Q9NYV9 303 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 PPM1HQ9ULR3 514 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 MTF2Q9Y483 593 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 FGF10O15520 208 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 FKBP9O95302 570 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 LBPP18428 481 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 TRIM16LQ309B1 348 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 FKBP9P1Q75LS8 142 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 DOT1LQ8TEK3 1739 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 EIF2B3Q9NR50 452 aaKnown RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 MAP3K13O43283 966 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 RAMP2O60895 175 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 ADSLP30566 484 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 GRM3Q14832 879 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 IQSEC1Q6DN90 963 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 FBXO32Q969P5 355 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 MYH1P12882 1939 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 EVPLLA8MZ36 301 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 ITM2AO43736 263 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 AOC1P19801 751 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 ATP6V1B2P21281 511 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 AKT1P31749 480 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 HARS2P49590 506 aaKnown RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 PLD3Q8IV08 490 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 RNF145Q96MT1 663 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 SERPINB11Q96P15 392 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 BCO2Q9BYV7 579 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 IQCA1LA6NCM1 817 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 DDNO94850 711 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 NFE2Q16621 373 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 EML3Q32P44 896 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 LSM12Q3MHD2 195 aaKnown RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 AARS2Q5JTZ9 985 aaKnown RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 PKN3Q6P5Z2 889 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 ACTRT2Q8TDY3 377 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 PTCD3Q96EY7 689 aaKnown RBP14.91□□□□□ -0.02
TCOF1-201ENST00000323668 C1orf21Q9H246 121 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 SIRPGQ9P1W8 387 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 NUDT5Q9UKK9 219 aa14.91□□□□□ -0.02
TCOF1-201ENST00000323668 DPYSL4O14531 572 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 MFSD10Q14728 455 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 NR6A1Q15406 480 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 NEDD8Q15843 81 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 PFKFB4Q16877 469 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 UBR7Q8N806 425 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 NAT14Q8WUY8 206 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 PANX3Q96QZ0 392 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CACYBPQ9HB71 228 aaKnown RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 PNPLA3Q9NST1 481 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF358Q9NW07 568 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 POLG2Q9UHN1 485 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 RAB26Q9ULW5 256 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 PCDHGB4Q9UN71 923 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 POMCP01189 267 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TTKP33981 857 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TMED10P49755 219 aaKnown RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TBX4P57082 545 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CNTD1Q8N815 330 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 AZIN2Q96A70 460 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TUBGCP5Q96RT8 1024 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CYLDQ9NQC7 956 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CHCHD3Q9NX63 227 aaKnown RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 NAV1Q8NEY1 1877 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 F5H5T6 163 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TK2O00142 265 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TSPAN1O60635 241 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 VPS4BO75351 444 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TSPAN8P19075 237 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 RECQLP46063 649 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SLC7A2P52569 658 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CDK18Q07002 472 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 GTF2H3Q13889 308 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 FAM98BQ52LJ0 330 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms