RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ADAMTS4O75173 837 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 HLA-DQB2P05538 268 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 GABRB3P28472 473 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 CTGFP29279 349 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 RAB10P61026 200 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 PRKAA1Q13131 559 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 ARTNQ5T4W7 220 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 KIAA0930Q6ICG6 404 aaPredicted RBP22.66■■□□□ 1.22
PNKP-201ENST00000322344 IRGCQ6NXR0 463 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 TMEM151AQ8N4L1 468 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 TRIB2Q92519 343 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 FSD1LQ9BXM9 530 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 OSBPL1AQ9BXW6 950 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 TCF7L2Q9NQB0 619 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 VTI1BQ9UEU0 232 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 SQORQ9Y6N5 450 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 WASF2Q9Y6W5 498 aa22.66■■□□□ 1.22
PNKP-201ENST00000322344 MATN2O00339 956 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 HDAC3O15379 428 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 PHGDHO43175 533 aaKnown RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 VAPBO95292 243 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ASGR1P07306 291 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 GLDCP23378 1020 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 YY1P25490 414 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 RPL14P50914 215 aaKnown RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 KLC1Q07866 573 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 KLF10Q13118 480 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 SLC9B1Q4ZJI4 515 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 FAM26DQ5JW98 314 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 PGM2L1Q6PCE3 622 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ADGRG6Q86SQ4 1221 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ZNF598Q86UK7 904 aaKnown RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 SLC41A1Q8IVJ1 513 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 PLCD3Q8N3E9 789 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.65■■□□□ 1.22
PNKP-201ENST00000322344 HS3ST4Q9Y661 456 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 PTPRDP23468 1912 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 NLRC5Q86WI3 1866 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 FAM95CA0A1B0GW59 222 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 CCDC78A2IDD5 438 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 TK2O00142 265 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ITGB1P05556 798 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 SLC2A3P11169 496 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 COX4I1P13073 169 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 STMN1P16949 149 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 SAT1P21673 171 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 GRIA4P48058 902 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 PSEN1P49768 467 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 KPNA2P52292 529 aaKnown RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 CRHR2Q13324 411 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 LRRC8EQ6NSJ5 796 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 RGMBQ6NW40 437 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ESRP1Q6NXG1 681 aaKnown RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 RANBP10Q6VN20 620 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 KCTD4Q8WVF5 259 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 JADE3Q92613 823 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 FATE1Q969F0 183 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ZNF419Q96HQ0 510 aaPredicted RBP22.65■■□□□ 1.22
PNKP-201ENST00000322344 RTKNQ9BST9 563 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 TREX1Q9NSU2 369 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 NDE1Q9NXR1 346 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 DONSONQ9NYP3 566 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 ARHGAP26Q9UNA1 814 aa22.65■■□□□ 1.22
PNKP-201ENST00000322344 TDRD15B5MCY1 1934 aaKnown RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 SLC22A2O15244 555 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 DCXO43602 365 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 SNUPNO95149 360 aaKnown RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 SBK3P0C264 359 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 PAPOLAP51003 745 aaKnown RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 MLLT6P55198 1093 aaPredicted RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 SEL1L3Q68CR1 1132 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 DCP1BQ8IZD4 617 aaKnown RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 C2CD4AQ8NCU7 369 aaPredicted RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 GABPB2Q8TAK5 448 aaPredicted RBP22.64■■□□□ 1.22
PNKP-201ENST00000322344 MICAL1Q8TDZ2 1067 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 FAM136AQ96C01 138 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 NMUR1Q9HB89 426 aa22.64■■□□□ 1.22
PNKP-201ENST00000322344 NUP205Q92621 2012 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 A0A087X1B8 175 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 A0A1W2PQH9 124 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 TARM1B6A8C7 271 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 CD151P48509 253 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 FCGRTP55899 365 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 MSANTD2Q6P1R3 559 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 KIAA0408Q6ZU52 694 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 MON1AQ86VX9 555 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 CENPLQ8N0S6 344 aaPredicted RBP22.64■■□□□ 1.21
PNKP-201ENST00000322344 ARHGAP18Q8N392 663 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 PHTF2Q8N3S3 785 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 FSTL5Q8N475 847 aaPredicted RBP22.64■■□□□ 1.21
PNKP-201ENST00000322344 MAPK15Q8TD08 544 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 PDCD6IPQ8WUM4 868 aaKnown RBP22.64■■□□□ 1.21
PNKP-201ENST00000322344 CNDP1Q96KN2 507 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 MRGPRX2Q96LB1 330 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 ZNF184Q99676 751 aaPredicted RBP22.64■■□□□ 1.21
PNKP-201ENST00000322344 SLC25A51Q9H1U9 297 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 NDFIP2Q9NV92 336 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 IPO11Q9UI26 975 aaKnown RBP22.64■■□□□ 1.21
PNKP-201ENST00000322344 SCML2Q9UQR0 700 aa22.64■■□□□ 1.21
PNKP-201ENST00000322344 TLR6Q9Y2C9 796 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms