RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PCDH10Q9P2E7 1040 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 SEPT3Q9UH03 358 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 CHD5Q8TDI0 1954 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 TYW5A2RUC4 315 aaKnown RBP18.1■□□□□ 0.49
RAB39A-201ENST00000320578 HIDE1A8MVS5 230 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 TRIM49D1C9J1S8 452 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 POU2F2P09086 479 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 CCNFP41002 786 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 OXCT1P55809 520 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 MPP7Q5T2T1 576 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 GRTP1Q5TC63 336 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 PLPP4Q5VZY2 271 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 RGS9BPQ6ZS82 235 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 ACMSDQ8TDX5 336 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF669Q96BR6 464 aaPredicted RBP18.1■□□□□ 0.49
RAB39A-201ENST00000320578 PRKD2Q9BZL6 878 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 NSMCE4AQ9NXX6 385 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 PLXNA4Q9HCM2 1894 aa18.1■□□□□ 0.49
RAB39A-201ENST00000320578 A0A0D9SEW6 157 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ATP9BO43861 1147 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PMPCBO75439 489 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 HNRNPA1P09651 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 DRD4P21917 467 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 CA4P22748 312 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ADRA1DP25100 572 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 DNAJB1P25685 340 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 WDR4P57081 412 aaKnown RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF235Q14590 738 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 CXorf57Q6NSI4 855 aaKnown RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PACS1Q6VY07 963 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PGBD5Q8N414 524 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PPHLN1Q8NEY8 458 aaKnown RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF473Q8WTR7 871 aaKnown RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 APOPT1Q96IL0 206 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 SERAC1Q96JX3 654 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PSKH2Q96QS6 385 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 APOL2Q9BQE5 337 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 MGME1Q9BQP7 344 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ATXN3LQ9H3M9 355 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 SMPD4Q9NXE4 827 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ZFATQ9P243 1243 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 UBA2Q9UBT2 640 aaPredicted RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 GGA2Q9UJY4 613 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 LOC285095A0A1B0GVY8 99 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 SPAG7O75391 227 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 RPA3P35244 121 aaPredicted RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 GP5P40197 560 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 SGSHP51688 502 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PDPK2PQ6A1A2 396 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 IL31Q6EBC2 164 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 OR7D4Q8NG98 312 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 TMA16Q96EY4 203 aaKnown RBP18.09■□□□□ 0.49
RAB39A-201ENST00000320578 CHRAC1Q9NRG0 131 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ZMYM5Q9UJ78 669 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 ARHGAP26Q9UNA1 814 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 TCAF1Q9Y4C2 921 aa18.09■□□□□ 0.49
RAB39A-201ENST00000320578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.08■□□□□ 0.48
RAB39A-201ENST00000320578 HMX2A2RU54 273 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 UGT1A9O60656 530 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 RFPL1O75677 317 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 TPH1P17752 444 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 CD86P42081 329 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 NEK3P51956 506 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 ZXDBP98169 803 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 CYP4F8P98187 520 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 ITKQ08881 620 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 LRRC14Q15048 493 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 RASSF3Q86WH2 238 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.48
RAB39A-201ENST00000320578 MAB21L3Q8N8X9 362 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 OR52K2Q8NGK3 314 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 MGARPQ8TDB4 240 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 FEM1CQ96JP0 617 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 UGT1A7Q9HAW7 530 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 UGT1A10Q9HAW8 530 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 UGT1A8Q9HAW9 530 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 DPP7Q9UHL4 492 aa18.08■□□□□ 0.48
RAB39A-201ENST00000320578 CXorf51AA0A1B0GTR3 108 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 LUC7L3O95232 432 aaKnown RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 PAPSS2O95340 614 aaPredicted RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CKMP06732 381 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SYN1P17600 705 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 PTPN2P17706 415 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CSE1LP55060 971 aaKnown RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 DSC2Q02487 901 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 LAMB3Q13751 1172 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 TEDDM1Q5T9Z0 273 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 NLRP9Q7RTR0 991 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 UNC5BQ8IZJ1 945 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 ISL2Q96A47 359 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 MFSD3Q96ES6 412 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 NSRP1Q9H0G5 558 aaKnown RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SH3BP1Q9Y3L3 701 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 OBSL1O75147 1896 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 HEATR9A2RTY3 570 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 ERICH4A6NGS2 130 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms