RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 RC3H2Q9HBD1 1191 aaKnown RBP13.28□□□□□ -0.28
CPNE1-201ENST00000317677 CDY1Q9Y6F8 540 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 FAM47DPA6NHR8 397 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 KCNK1O00180 336 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 CDH16O75309 829 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 TBX18O95935 607 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 TPSB2P20231 275 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 HOXC13P31276 330 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 WDR4P57081 412 aaKnown RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 GALNT2Q10471 571 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 NR1H3Q13133 447 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 PPP2R5DQ14738 602 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 TPSAB1Q15661 275 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 MGAT5BQ3V5L5 792 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 ANKS3Q6ZW76 656 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 TDRPQ86YL5 185 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 CROCCP3Q8IVE0 287 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 ARHGAP12Q8IWW6 846 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 VPS52Q8N1B4 723 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 ATP11CQ8NB49 1132 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 CCNYQ8ND76 341 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 SPPL2BQ8TCT7 592 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 CELF6Q96J87 481 aaKnown RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 FCRL2Q96LA5 508 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 SEPT5Q99719 369 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-201ENST00000317677 INIPQ9NRY2 104 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 NDFIP2Q9NV92 336 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 MTRRQ9UBK8 725 aa13.27□□□□□ -0.28
CPNE1-201ENST00000317677 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 MAGEC1O60732 1142 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 RNASEH1O60930 286 aaKnown RBP13.27□□□□□ -0.29
CPNE1-201ENST00000317677 ALOX15P16050 662 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-201ENST00000317677 PTPN3P26045 913 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 YWHAQP27348 245 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 PSMB4P28070 264 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 CCR1P32246 355 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 PPIDQ08752 370 aaKnown RBP13.27□□□□□ -0.29
CPNE1-201ENST00000317677 TAF10Q12962 218 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 IKBKEQ14164 716 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 KRT72Q14CN4 511 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 TMED2Q15363 201 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 PDK4Q16654 411 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 CLPPQ16740 277 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-201ENST00000317677 PIK3R6Q5UE93 754 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 C4orf22Q6V702 233 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 MPP5Q8N3R9 675 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 FNDC8Q8TC99 324 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-201ENST00000317677 IGSF21Q96ID5 467 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 NSL1Q96IY1 281 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 SPATA17Q96L03 361 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 DHRS4Q9BTZ2 278 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 FBXO44Q9H4M3 255 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 HS3ST4Q9Y661 456 aa13.27□□□□□ -0.29
CPNE1-201ENST00000317677 E9PBE3 544 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 H7C4K7 107 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 VILLO15195 856 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 GYG2O15488 501 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 PRPF4O43172 522 aaKnown RBP eCLIP13.26□□□□□ -0.292e-8■■□□□ 12.2
CPNE1-201ENST00000317677 DNAJC6O75061 913 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 MOCS2O96007 188 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-201ENST00000317677 SRGAP2BP0DMP2 458 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 ANPEPP15144 967 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 ZNF135P52742 658 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-201ENST00000317677 PDE1BQ01064 536 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 FPGSQ05932 587 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 ZBTB17Q13105 803 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 PDCD4Q53EL6 469 aaKnown RBP13.26□□□□□ -0.29
CPNE1-201ENST00000317677 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 SLC8B1Q6J4K2 584 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 IZUMO2Q6UXV1 221 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 ZNF683Q8IZ20 524 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 GIPC2Q8TF65 315 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 MRRFQ96E11 262 aaKnown RBP13.26□□□□□ -0.29
CPNE1-201ENST00000317677 ACSS3Q9H6R3 686 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 GPAMQ9HCL2 828 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 MLXIPLQ9NP71 852 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPNE1-201ENST00000317677 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 RAD54BQ9Y620 910 aa13.26□□□□□ -0.29
CPNE1-201ENST00000317677 HTR3EA5X5Y0 456 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 OPHN1O60890 802 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TIMP1P01033 207 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 ZDHHC11BP0C7U3 371 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TSHRP16473 764 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CD68P34810 354 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms