RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CEP295NLQ96MC4 621 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PCDHGB3Q9Y5G1 929 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PEX14O75381 377 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ASLP04424 464 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ANPEPP15144 967 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ALDH9A1P49189 494 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ADGRF2Q8IZF7 708 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ENDOVQ8N8Q3 282 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 BHLHE22Q8NFJ8 381 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 KCNV2Q8TDN2 545 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 IPCEF1Q8WWN9 437 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 POLR1EQ9GZS1 481 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ATF5Q9Y2D1 282 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 LRRC42Q9Y546 428 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 POLR2AP24928 1970 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 NRCAMQ92823 1304 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
COL6A5-202ENST00000312481 RAB10P61026 200 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SULT2A1Q06520 285 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FUT2Q10981 343 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 PDK3Q15120 406 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TYSND1Q2T9J0 566 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 FAM126BQ8IXS8 530 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ITFG1Q8TB96 612 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 SOCS4Q8WXH5 440 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 TNFRSF25Q93038 417 aa8.93□□□□□ -0.98
COL6A5-202ENST00000312481 ADAMTSL3P82987 1691 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PIPSLA2A3N6 862 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 MGAT4DA6NG13 374 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SLC28A1O00337 649 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 LRIG2O94898 1065 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 THP07101 528 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CDC42P60953 191 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SNAP47Q5SQN1 464 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 FAXCQ5TGI0 409 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DSG4Q86SJ6 1040 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SLC38A2Q96QD8 506 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 THUMPD3Q9BV44 507 aaKnown RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SNX7Q9UNH6 387 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ING4Q9UNL4 249 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PCDHGA3Q9Y5H0 932 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ANK1P16157 1881 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ISPDA4D126 451 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CYP2A6P11509 494 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 NME3Q13232 169 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ZSWIM2Q8NEG5 633 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 WNT8BQ93098 351 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 BTAF1O14981 1849 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PRAMEF22A3QJZ6 481 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 RHOBTB1O94844 696 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PTPN9P43378 593 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 NFYCQ13952 458 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PTPROQ16827 1216 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CLYBLQ8N0X4 340 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SH2D3AQ9BRG2 576 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CD248Q9HCU0 757 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 hCG_1818297A0A087WSY0 165 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SLITRK3O94933 977 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 MATKP42679 507 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ELP6Q0PNE2 266 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 RBM48Q5RL73 367 aaKnown RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DCLRE1AQ6PJP8 1040 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 AFTPHQ6ULP2 937 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 KIF2BQ8N4N8 673 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 TUBGCP5Q96RT8 1024 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DBNDD1Q9H9R9 158 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 MLXIPLQ9NP71 852 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 MAGEB3O15480 346 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PENKP01210 267 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF177Q13360 481 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 LSM12Q3MHD2 195 aaKnown RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ERI1Q8IV48 349 aaKnown RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DDX18Q9NVP1 670 aaKnown RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CFL2Q9Y281 166 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PEX16Q9Y5Y5 336 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DLGAP3O95886 979 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CHRNA5P30532 468 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 NDUFA9Q16795 377 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SPDYE7PQ495Y7 208 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 LMBRD2Q68DH5 695 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 EFCAB12Q6NXP0 572 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 RFKQ969G6 155 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 DDIT4Q9NX09 232 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PRKAG2Q9UGJ0 569 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ERGIC3Q9Y282 383 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 SBF2Q86WG5 1849 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PAPPAQ13219 1627 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ATRNL1Q5VV63 1379 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PTPN3P26045 913 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 TKTL1P51854 596 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PGM5Q15124 567 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CEP78Q5JTW2 689 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 REM2Q8IYK8 340 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 TOP6BLQ8N6T0 577 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms