RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PTPN2P17706 415 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 HOXD9P28356 352 aaPredicted RBP16.98■□□□□ 0.31
CLCF1-201ENST00000312438 CD86P42081 329 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 ZNF235Q14590 738 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 RFTN1Q14699 578 aaPredicted RBP16.98■□□□□ 0.31
CLCF1-201ENST00000312438 ZSCAN26Q16670 478 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 FAM217AQ8IXS0 508 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 PGBD5Q8N414 524 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 PTCD2Q8WV60 388 aaKnown RBP16.98■□□□□ 0.31
CLCF1-201ENST00000312438 TADA1Q96BN2 335 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 MFSD3Q96ES6 412 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 CHMP6Q96FZ7 201 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 SH3BP1Q9Y3L3 701 aa16.98■□□□□ 0.31
CLCF1-201ENST00000312438 TRIM49D1C9J1S8 452 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 GFRA2O00451 464 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 GRM6O15303 877 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 UGT1A9O60656 530 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 TBL1XO60907 577 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 MMP2P08253 660 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 MYOGP15173 224 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 CA4P22748 312 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 DSC2Q02487 901 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 SLC18A2Q05940 514 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 CAMK1Q14012 370 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 BANPQ8N9N5 519 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 HJURPQ8NCD3 748 aaPredicted RBP16.97■□□□□ 0.31
CLCF1-201ENST00000312438 SLC46A2Q9BY10 475 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 RABEP2Q9H5N1 569 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 UGT1A7Q9HAW7 530 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 UGT1A10Q9HAW8 530 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 UGT1A8Q9HAW9 530 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 ATP13A1Q9HD20 1204 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 ZFATQ9P243 1243 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 UBA2Q9UBT2 640 aaPredicted RBP16.97■□□□□ 0.31
CLCF1-201ENST00000312438 SEPT3Q9UH03 358 aa16.97■□□□□ 0.31
CLCF1-201ENST00000312438 H0Y626 953 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 ZWINTO95229 277 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 ERVK-10P10266 1014 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 GJA1P17302 382 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 HOXA9P31269 272 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.31
CLCF1-201ENST00000312438 IRS1P35568 1242 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 EPHA5P54756 1037 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 IL9RQ01113 521 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 DNAJC3Q13217 504 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 PCSK7Q16549 785 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 RNF219Q5W0B1 726 aaPredicted RBP16.96■□□□□ 0.31
CLCF1-201ENST00000312438 PDE12Q6L8Q7 609 aaKnown RBP16.96■□□□□ 0.31
CLCF1-201ENST00000312438 CXorf57Q6NSI4 855 aaKnown RBP16.96■□□□□ 0.31
CLCF1-201ENST00000312438 SH2D5Q6ZV89 423 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 KDELC2Q7Z4H8 507 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 SERAC1Q96JX3 654 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 ZNF317Q96PQ6 595 aaPredicted RBP16.96■□□□□ 0.31
CLCF1-201ENST00000312438 MUC3BQ9H195 1237 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 MAN1C1Q9NR34 630 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 CFAP97Q9P2B7 532 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
CLCF1-201ENST00000312438 KIAA1671Q9BY89 1806 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 ADRA1DP25100 572 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 DDX6P26196 483 aaKnown RBP eCLIP16.96■□□□□ 0.3
CLCF1-201ENST00000312438 ALG1LQ6GMV1 187 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 PACS1Q6VY07 963 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 TIFABQ6ZNK6 161 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 RASSF3Q86WH2 238 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 CPXM2Q8N436 756 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 CARNMT1Q8N4J0 409 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 PPHLN1Q8NEY8 458 aaKnown RBP16.96■□□□□ 0.3
CLCF1-201ENST00000312438 SAMD11Q96NU1 681 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 PSKH2Q96QS6 385 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 SEMA3CQ99985 751 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 MRM3Q9HC36 420 aaKnown RBP16.96■□□□□ 0.3
CLCF1-201ENST00000312438 MLXIPLQ9NP71 852 aa16.96■□□□□ 0.3
CLCF1-201ENST00000312438 SOBPA7XYQ1 873 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 GOLGA8RI6L899 631 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 TM9SF1O15321 606 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 CLASP2O75122 1294 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 RFPL2O75678 378 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 ARHGEF15O94989 841 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 ASMTLO95671 621 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 EPOP01588 193 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 HNRNPA1P09651 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 PYGBP11216 843 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 NMBRP28336 390 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 WDR4P57081 412 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 SEPT7Q16181 437 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 GRTP1Q5TC63 336 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 MROH9Q5TGP6 573 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 LEMD2Q8NC56 503 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 KLF6Q99612 283 aaPredicted RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 CPNE1Q99829 537 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 MGME1Q9BQP7 344 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 CINPQ9BW66 212 aaPredicted RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 DNMT3BQ9UBC3 853 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms