RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 KCNK4Q9NYG8 393 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 CRLS1Q9UJA2 301 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 VAV1P15498 845 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ADSSP30520 456 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NPTX2P47972 431 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 CUL2Q13617 745 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NR6A1Q15406 480 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ABRAXAS1Q6UWZ7 409 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 EXD1Q8NHP7 514 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TRIB2Q92519 343 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 EZH1Q92800 747 aaPredicted RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 PPP1R14AQ96A00 147 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 RAD9AQ99638 391 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NMRK1Q9NWW6 199 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 GALNT8Q9NY28 637 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 AAR2Q9Y312 384 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 VPS26AO75436 327 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ADRA1DP25100 572 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ELK3P41970 407 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TIMM50Q3ZCQ8 353 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MZT2AQ6P582 158 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ZNF276Q8N554 614 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 AMER2Q8N7J2 671 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ATP6V0D2Q8N8Y2 350 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TRAPPC12Q8WVT3 735 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 C17orf50Q8WW18 174 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SMG7Q92540 1137 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 CPB2Q96IY4 423 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 PIGUQ9H490 435 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 WDR41Q9HAD4 459 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 CCDC59Q9P031 241 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 MGAT4DA6NG13 374 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 NCAM1P13591 858 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CYP11B1P15538 503 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SSTR1P30872 391 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 MAPKAPK2P49137 400 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SPIDRQ14159 915 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CHRDL2Q6WN34 429 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 FBXL16Q8N461 479 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PCDH20Q8N6Y1 951 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 LRRC17Q8N6Y2 441 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 GAD1Q99259 594 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 NAT9Q9BTE0 207 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 DPY30Q9C005 99 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TRMT13Q9NUP7 481 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 GPATCH2LQ9NWQ4 482 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SNTG2Q9NY99 539 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PKD1L3Q7Z443 1732 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 OR6C75A6NL08 312 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 H3BN98 237 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CES2O00748 559 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SNHG28P0DPA3 235 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ZNF37AP17032 561 aaPredicted RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 SLC26A3P40879 764 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 RFX3P48380 749 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 STARP49675 285 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 MGAT5Q09328 741 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PDK2Q15119 407 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PSMD5Q16401 504 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PKN1Q16512 942 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TTLL9Q3SXZ7 439 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ZIK1Q3SY52 487 aaPredicted RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 RNF220Q5VTB9 566 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ADGRF2Q8IZF7 708 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 DBF4BQ8NFT6 615 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 APOL2Q9BQE5 337 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 MLPHQ9BV36 600 aaPredicted RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 GTF2IRD1Q9UHL9 959 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PADI3Q9ULW8 664 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PADI4Q9UM07 663 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 RIPK3Q9Y572 518 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 OTOP3Q7RTS5 596 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 C16orf62Q7Z3J2 963 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 DGCR14Q96DF8 476 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 ZBED3Q96IU2 234 aaPredicted RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 ACOX2Q99424 681 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS41-202ENST00000310301 ANAPC2Q9UJX6 822 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 NCKAP1Q9Y2A7 1128 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PCDHGA3Q9Y5H0 932 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ATXN2Q99700 1313 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 H7C0S8 307 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 S100A6P06703 90 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TPBGLP0DKB5 382 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 LRPAP1P30533 357 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 NDUFAF6Q330K2 333 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SPDYCQ5MJ68 293 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ERMARDQ5T6L9 678 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 GRTP1Q5TC63 336 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SCARA3Q6AZY7 606 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TTI2Q6NXR4 508 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PGBD2Q6P3X8 592 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 EMC1Q8N766 993 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 SLC20A1Q8WUM9 679 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms