RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 MTHFRP42898 656 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 MAGEA9P43362 315 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 MAPKAPK2P49137 400 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 RHBDL3P58872 404 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 ZMYND11Q15326 602 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 NR6A1Q15406 480 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 LY6KQ17RY6 165 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 INTS6LQ5JSJ4 861 aaKnown RBP3.23□□□□□ -1.89
CLOCK-201ENST00000309964 TMEM26Q6ZUK4 368 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 KCNMB4Q86W47 210 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 PLD3Q8IV08 490 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 UBA3Q8TBC4 463 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 METTL6Q8TCB7 284 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 CNBD2Q96M20 576 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 COPS8Q99627 209 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 KCNS3Q9BQ31 491 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 TTYH1Q9H313 450 aaPredicted RBP3.23□□□□□ -1.89
CLOCK-201ENST00000309964 NRDE2Q9H7Z3 1164 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC177Q9NQR7 707 aaPredicted RBP3.23□□□□□ -1.89
CLOCK-201ENST00000309964 IL1RAPL1Q9NZN1 696 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 COPG2Q9UBF2 871 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 CROTQ9UKG9 612 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 ADAM21Q9UKJ8 722 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 RUVBL1Q9Y265 456 aaKnown RBP3.23□□□□□ -1.89
CLOCK-201ENST00000309964 SLC9A8Q9Y2E8 581 aa3.23□□□□□ -1.89
CLOCK-201ENST00000309964 SMCHD1A6NHR9 2005 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PRR23AA6NEV1 266 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAN2B1O00754 1011 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FOXD2O60548 495 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RB1P06400 928 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RPA3P35244 121 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 UGT1A5P35504 534 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BUD31P41223 144 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC12A3P55017 1021 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CSHL1Q14406 222 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ARID5BQ14865 1188 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SAMD4BQ5PRF9 694 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 HYIQ5T013 277 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CASP12Q6UXS9 341 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MIER2Q8N344 545 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OXR1Q8N573 874 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TAB3Q8N5C8 712 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C10orf53Q8N6V4 93 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF398Q8TD17 642 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ACER1Q8TDN7 264 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TMEM175Q9BSA9 504 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZFYVE1Q9HBF4 777 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NT5MQ9NPB1 228 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 THAP1Q9NVV9 213 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ANAPC2Q9UJX6 822 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ST3GAL5Q9UNP4 418 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DNAJC16Q9Y2G8 782 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 IRAK3Q9Y616 596 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC37A3O60309 1634 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 A0A0A0MRY4 1105 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 A0A0G2JLL6 359 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PRR5-ARHGAP8B1AHC4 643 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OR10H2O60403 315 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DTNBO60941 627 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KLK3P07288 261 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PLEKP08567 350 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CXCL8P10145 99 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MLH1P40692 756 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NDST2P52849 883 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RPL19P84098 196 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PRR5P85299 388 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DDR2Q16832 855 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SHROOM1Q2M3G4 852 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 AP5B1Q2VPB7 878 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ANXA8L1Q5VT79 327 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ESRP1Q6NXG1 681 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ARCQ7LC44 396 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PRRT2Q7Z6L0 340 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KBTBD6Q86V97 674 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 GPSM1Q86YR5 675 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CBWD2Q8IUF1 395 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZDHHC13Q8IUH4 622 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAM174AQ8TBP5 190 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OXER1Q8TDS5 423 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 STK32AQ8WU08 396 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 STYXQ8WUJ0 223 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAR1Q8WVX9 515 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C1orf54Q8WWF1 131 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SPATA13Q96N96 652 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CORO1BQ9BR76 489 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NTPCRQ9BSD7 190 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAGEH1Q9H213 219 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CPVLQ9H3G5 476 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MUC13Q9H3R2 512 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C10orf88Q9H8K7 445 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 POLR1BQ9H9Y6 1135 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KLC4Q9NSK0 619 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 VAV3Q9UKW4 847 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 HPS5Q9UPZ3 1129 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NUP214P35658 2090 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KRT33AO76009 404 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ITGAVP06756 1048 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 LYNP07948 512 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ME2P23368 584 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FASP25445 335 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms