RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CYP4Z2PQ8N1L4 340 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 PTGR2Q8N8N7 351 aaPredicted RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 NKX2-3Q8TAU0 364 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 TRPC4APQ8TEL6 797 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 BSNDQ8WZ55 320 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 COL20A1Q9P218 1284 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 CCDC159P0C7I6 412 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 PDK4Q16654 411 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 LRRC74BQ6ZQY2 392 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 TRAPPC5Q8IUR0 188 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 MSL3Q8N5Y2 521 aaKnown RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 ALG3Q92685 438 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 NLNQ9BYT8 704 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 ASAH2Q9NR71 780 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 CLUHO75153 1309 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 IGLV3-22A0A075B6J6 115 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 GRK4P32298 578 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 BRMS1LQ5PSV4 323 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 ZNF384Q8TF68 577 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 STK32AQ8WU08 396 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 ATP13A3Q9H7F0 1226 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 ENOPH1Q9UHY7 261 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 LRCH1Q9Y2L9 728 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 FAM237BA0A1B0GVD1 139 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ALOX15BO15296 676 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 RAB10P61026 200 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 NOGQ13253 232 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 C1DQ13901 141 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 SLC25A52Q3SY17 297 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 RNF43Q68DV7 783 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 METTL3Q86U44 580 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 CDK20Q8IZL9 346 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ZNF398Q8TD17 642 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 UTP15Q8TED0 518 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 DLG3Q92796 817 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 RAD21L1Q9H4I0 556 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 AFDNP55196 1824 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 BUD23O43709 281 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 MMP3P08254 477 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 PABPC1P11940 636 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 MMP8P22894 467 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 LRPAP1P30533 357 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 HJURPQ8NCD3 748 aaPredicted RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 CSGALNACT1Q8TDX6 532 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 MRPL48Q96GC5 212 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 PARP4Q9UKK3 1724 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 BTBD19C9JJ37 291 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 TBL1XO60907 577 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ATG7O95352 703 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ITGA2BP08514 1039 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 TRIM16LQ309B1 348 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 STRADAQ7RTN6 431 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ITFG1Q8TB96 612 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 RMND5BQ96G75 393 aaPredicted RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 PCDH18Q9HCL0 1135 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 FSBPO95073 299 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 TCF3P15923 654 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 ABL2P42684 1182 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
USP42-201ENST00000306177 DEFB115Q30KQ5 88 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 GRIN3AQ8TCU5 1115 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 C9orf16Q9BUW7 83 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 KLQ9UEF7 1012 aa16.11■□□□□ 0.17
USP42-201ENST00000306177 OR6C75A6NL08 312 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 CLOCKO15516 846 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 SNUPNO95149 360 aaKnown RBP16.1■□□□□ 0.17
USP42-201ENST00000306177 CACNA2D1P54289 1103 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 DDR2Q16832 855 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 ANKRD23Q86SG2 305 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 TPD52L3Q96J77 140 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 BBS4Q96RK4 519 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 MRPL57Q9BQC6 102 aaKnown RBP16.1■□□□□ 0.17
USP42-201ENST00000306177 SLC27A5Q9Y2P5 690 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 LMO7Q8WWI1 1683 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 GRIA4P48058 902 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 ZNF621Q6ZSS3 439 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 RASGEF1CQ8N431 466 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 SELENOMQ8WWX9 145 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 ELMO1Q92556 727 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 NIFKQ9BYG3 293 aaKnown RBP16.1■□□□□ 0.17
USP42-201ENST00000306177 ST6GALNAC4Q9H4F1 302 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 DUSP12Q9UNI6 340 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 INVSQ9Y283 1065 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 GLTPD2A6NH11 291 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 KPNA5O15131 536 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 MLYCDO95822 493 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 TFEBP19484 476 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 FLT3LGP49771 235 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 IRF8Q02556 426 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 PLEKHA7Q6IQ23 1121 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 RDH11Q8TC12 318 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 SYBUQ9NX95 663 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 ARHGAP28Q9P2N2 729 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms