RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 DCXO43602 365 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 HCRTO43612 131 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 GLRA3O75311 464 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 JRKO75564 520 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 LGALS2P05162 132 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CXCL8P10145 99 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 HOXB9P17482 250 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 KCNA5P22460 613 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 GRK2P25098 689 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 MPSTP25325 297 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CD6P30203 668 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ADRA1AP35348 466 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 C1QTNF8P60827 252 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SLC25A52Q3SY17 297 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 KCTD21Q4G0X4 260 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 UBXN11Q5T124 520 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 EFCAB12Q6NXP0 572 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 FASTKD5Q7L8L6 764 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 CMC1Q7Z7K0 106 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ZC3HC1Q86WB0 502 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 CEP97Q8IW35 865 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RIMKLAQ8IXN7 391 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 VPS52Q8N1B4 723 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DCLK2Q8N568 766 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NPWQ8N729 165 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PIP4K2CQ8TBX8 421 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ADAM32Q8TC27 787 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SPPL2BQ8TCT7 592 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CHPT1Q8WUD6 406 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ISOC1Q96CN7 298 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CFAP36Q96G28 342 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 HPDLQ96IR7 371 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 COG8Q96MW5 612 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SPATA13Q96N96 652 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PPP1R10Q96QC0 940 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 SIGLEC11Q96RL6 698 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NANOGQ9H9S0 305 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ADARB2Q9NS39 739 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 TMEM30AQ9NV96 361 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 GPATCH2LQ9NWQ4 482 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CHCHD3Q9NX63 227 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 NCKIPSDQ9NZQ3 722 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DCDC2Q9UHG0 476 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PACSIN3Q9UKS6 424 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ZNF232Q9UNY5 417 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RGSL1A5PLK6 1076 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 IQCA1LA6NCM1 817 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RRN3P2A6NIE6 340 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 HHLA1C9JL84 531 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PPEF2O14830 753 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 MFSD11O43934 449 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RSL1D1O76021 490 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 H6PDO95479 791 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ALDOCP09972 364 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 CYP2C9P11712 490 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CYP2B6P20813 491 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PNPLA4P41247 253 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NDST1P52848 882 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RHDQ02161 417 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 TRPC3Q13507 836 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 TMEM132DQ14C87 1099 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ATP6AP1Q15904 470 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 LRRC36Q1X8D7 754 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ANKRD26P1Q6NSI1 321 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DCUN1D2Q6PH85 259 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CNSTQ6PJW8 725 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 TMEM207Q6UWW9 146 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ANKRD23Q86SG2 305 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RSPH3Q86UC2 560 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PLPP6Q8IY26 295 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ST13P4Q8IZP2 240 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 TNS4Q8IZW8 715 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ZNF567Q8N184 647 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ZBTB8BQ8NAP8 495 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 RP9Q8TA86 221 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 MCUR1Q96AQ8 359 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NAA50Q9GZZ1 169 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 COQ10BQ9H8M1 238 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 WDR6Q9NNW5 1121 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 DPP3Q9NY33 737 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RRN3Q9NYV6 651 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 TSPAN16Q9UKR8 245 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DTNAQ9Y4J8 743 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 WASH4PA8MWX3 477 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM72CH0Y354 149 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 AP3B1O00203 1094 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NCAM2O15394 837 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 KCNN4O15554 427 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DYNC1LI2O43237 492 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 IFNB1P01574 187 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 GJB1P08034 283 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PORP16435 677 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 PGAM1P18669 254 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ATP6V1B2P21281 511 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PCMT1P22061 227 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CALRP27797 417 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 MATKP42679 507 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms