RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 DPP9Q86TI2 863 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 ZCCHC7Q8N3Z6 543 aaKnown RBP13.21□□□□□ -0.3
TRIM35-201ENST00000305364 PQLC3Q8N755 202 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 TUBGCP3Q96CW5 907 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 FAR2Q96K12 515 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 KLHL32Q96NJ5 620 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 PGLYRP2Q96PD5 576 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 CSPG4P5Q96PW8 444 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 SLC39A3Q9BRY0 314 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 JCHAINP01591 159 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 CD97P48960 835 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 PRKAA2P54646 552 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 OLIG2Q13516 323 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 DUS1LQ6P1R4 473 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 DGKBQ9Y6T7 804 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 K7EPI3 171 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 M0QZ92 97 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 NRP2O60462 931 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 CLASP2O75122 1294 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 TRPC1P48995 793 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 RHDQ02161 417 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 RELAQ04206 551 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 SEMA5AQ13591 1074 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 NAPEPLDQ6IQ20 393 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 DACH2Q96NX9 599 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 DPP3Q9NY33 737 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 MOCS1Q9NZB8 636 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 CNOT6Q9ULM6 557 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 PTGES3LE9PB15 166 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 LDLRP01130 860 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 SERPINB10P48595 397 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 TUBA4AP68366 448 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 GRM3Q14832 879 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 CHST15Q7LFX5 561 aaPredicted RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
TRIM35-201ENST00000305364 RNF145Q96MT1 663 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 BIRC8Q96P09 236 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 MRIQ9BWK5 157 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 TEX13BQ9BXU2 312 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 CNTN6Q9UQ52 1028 aa13.2□□□□□ -0.3
TRIM35-201ENST00000305364 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 B4GALT5O43286 388 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TOMM70O94826 608 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ZNF182P17025 639 aaPredicted RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 SLC7A1P30825 629 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 CA8P35219 290 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GPD2P43304 727 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 BCAP31P51572 246 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PGGT1BP53609 377 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PLIN5Q00G26 463 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 CTBP1Q13363 440 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ARL13BQ3SXY8 428 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 BORAQ6PGQ7 559 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PYROXD2Q8N2H3 581 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GLMNQ92990 594 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 SLC29A1Q99808 456 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 SIK2Q9H0K1 926 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 HMG20AQ9NP66 347 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 DTLQ9NZJ0 730 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GPC6Q9Y625 555 aaPredicted RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 DFFAO00273 331 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TADA2AO75478 443 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GJB1P08034 283 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 HDCP19113 662 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 NFYCQ13952 458 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 SQLEQ14534 574 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ZNF555Q8NEP9 628 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PPHLN1Q8NEY8 458 aaKnown RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 IRGQQ8WZA9 623 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TAMM41Q96BW9 452 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 OXSMQ9NWU1 459 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ANKRD6Q9Y2G4 727 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 C9JVG2 144 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms