RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MYL12AP19105 171 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MMP14P50281 582 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 GALK1P51570 392 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 USP4Q13107 963 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 EURLQ9NYK6 297 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 IPPQ9Y573 584 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MLYCDO95822 493 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 EGFRP00533 1210 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TCF3P15923 654 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 CYP2A7P20853 494 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 SAMD7Q7Z3H4 446 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 NKD2Q969F2 451 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ABCB10Q9NRK6 738 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 CATSPERZQ9NTU4 200 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 UBA2Q9UBT2 640 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 H7C4K7 107 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TK2O00142 265 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PRDX6P30041 224 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 FMO4P31512 558 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 CYP2C18P33260 490 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TBX4P57082 545 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 RHBDL3P58872 404 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PROSER1Q86XN7 944 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 NKAPQ8N5F7 415 aaKnown RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MYDGFQ969H8 173 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ZHX1-C8orf76Q96EF9 292 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ZFP42Q96MM3 310 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MIEF1Q9NQG6 463 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ZNF180Q9UJW8 692 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 GMPPBQ9Y5P6 360 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 LOC100506127A0A0U1RQW1 187 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 FGF10O15520 208 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PPP2R1BP30154 601 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 IL2P60568 153 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 NOMO1Q15155 1222 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 RFX4Q33E94 735 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 GLT6D1Q7Z4J2 308 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TFAP2DQ7Z6R9 452 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ANKRD13AQ8IZ07 590 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PSMA8Q8TAA3 256 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 HOPXQ9BPY8 73 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 COLEC11Q9BWP8 271 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 EPB41L1Q9H4G0 881 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 TUBA8Q9NY65 449 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 XPR1Q9UBH6 696 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 C2orf71A6NGG8 1288 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 CBX4O00257 560 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 SIN3BO75182 1162 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PEX11AO75192 247 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 EPN2O95208 641 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 RTP1P59025 263 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 PPIL2Q13356 520 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 SPESP1Q6UW49 350 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 GALNT15Q8N3T1 639 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 MAB21L3Q8N8X9 362 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
COL3A1-201ENST00000304636 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
COL3A1-201ENST00000304636 IDH3BO43837 385 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 STAU1O95793 577 aaKnown RBP12.98□□□□□ -0.33
COL3A1-201ENST00000304636 ERBB2P04626 1255 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 TSPAN19P0C672 248 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 NFKB1P19838 968 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 ZC3H12AQ5D1E8 599 aaKnown RBP12.98□□□□□ -0.33
COL3A1-201ENST00000304636 ZNF540Q8NDQ6 660 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 OMDQ99983 421 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 CHID1Q9BWS9 393 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 FBXO44Q9H4M3 255 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 OPTCQ9UBM4 332 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 MTA2O94776 668 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 TFEBP19484 476 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 MZT2BQ6NZ67 158 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
COL3A1-201ENST00000304636 CDH24Q86UP0 819 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 CARNMT1Q8N4J0 409 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 WDR36Q8NI36 951 aaKnown RBP12.98□□□□□ -0.33
COL3A1-201ENST00000304636 OR12D3Q9UGF7 316 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 H3BRB1 525 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 HOXD10P28358 340 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 OR1E1P30953 314 aa12.98□□□□□ -0.33
COL3A1-201ENST00000304636 PHKG1Q16816 387 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms