RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PDE4DIPQ5VU43 2346 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 A0A0D9SEW6 157 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 TYROBPO43914 113 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CACNG3O60359 315 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 F11P03951 625 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 WDR4P57081 412 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 PACS1Q6VY07 963 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 EP400NLQ6ZTU2 488 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SPATS2Q86XZ4 545 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 BANPQ8N9N5 519 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 BHMTQ93088 406 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ZNF317Q96PQ6 595 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 FGFR1OP2Q9NVK5 253 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC17A6Q9P2U8 582 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 UBA2Q9UBT2 640 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CBX4O00257 560 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 PRAMEF11O60813 436 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 BMPR1AP36894 532 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 GP5P40197 560 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC1A5Q15758 541 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 QPCTQ16769 361 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ARTNQ5T4W7 220 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 POTEHQ6S545 545 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 TMEM135Q86UB9 458 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 NDUFAF2Q8N183 169 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CCDC63Q8NA47 563 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 MZB1Q8WU39 189 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ATXN7L3BQ96GX2 97 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 FCRL3Q96P31 734 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CPNE1Q99829 537 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SEMA3CQ99985 751 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 MCOLN1Q9GZU1 580 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CCL16O15467 120 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 TBL1XO60907 577 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 LILRB3O75022 631 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ASMTLO95671 621 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CDC25CP30307 473 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SPRP35270 261 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 STRA8Q7Z7C7 330 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 CCDC197Q8NCU1 140 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 FATE1Q969F0 183 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 TMA16Q96EY4 203 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ZNF419Q96HQ0 510 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 SEC16BQ96JE7 1060 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 FAM111AQ96PZ2 611 aa14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 IARS2Q9NSE4 1012 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 NYNRINQ9P2P1 1898 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-201ENST00000303383 ADRA1DP25100 572 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 FAM47EQ6ZV65 393 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 HS6ST3Q8IZP7 471 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 OTUD6BQ8N6M0 293 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 POF1BQ8WVV4 589 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 IMP4Q96G21 291 aaKnown RBP14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 MRGPRX2Q96LB1 330 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC22A12Q96S37 553 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 PITPNM3Q9BZ71 974 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 SEPT3Q9UH03 358 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 TRAV19A0A0A6YYK7 116 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 C1QAP02745 245 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 NMBRP28336 390 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 NIPAL4Q0D2K0 466 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 CDH18Q13634 790 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 RNF187Q5TA31 235 aaPredicted RBP14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 GRTP1Q5TC63 336 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 RNF219Q5W0B1 726 aaPredicted RBP14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 PDPK2PQ6A1A2 396 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 PKN3Q6P5Z2 889 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 CHST9Q7L1S5 443 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 PRICKLE1Q96MT3 831 aaPredicted RBP14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 ZNF599Q96NL3 588 aa14.71□□□□□ -0.05
SHCBP1-201ENST00000303383 A0A1W2PRU2 124 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 ILVBLA1L0T0 632 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 LCHNA4D1U4 455 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 C1RP00736 705 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 CHRNA4P43681 627 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 ERVFC1P60507 584 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 HJURPQ8NCD3 748 aaPredicted RBP14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 DENND1AQ8TEH3 1009 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 SRPK1Q96SB4 655 aaKnown RBP14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 TLR9Q9NR96 1032 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 SLC17A7Q9P2U7 560 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 ZNF212Q9UDV6 495 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 RWDD3Q9Y3V2 267 aa14.71□□□□□ -0.06
SHCBP1-201ENST00000303383 TTC24A2A3L6 582 aaPredicted RBP14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 GOLGA8TH3BQL2 631 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 PEX11BO96011 259 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 SERPINF2P08697 491 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 TYK2P29597 1187 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 SERPINH1P50454 418 aaKnown RBP14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 DNAJC3Q13217 504 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 C5orf22Q49AR2 442 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 ZNF449Q6P9G9 518 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 PHOSPHO2Q8TCD6 241 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 DDI1Q8WTU0 396 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 NSMCE4AQ9NXX6 385 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 ITGA2BP08514 1039 aa14.7□□□□□ -0.06
SHCBP1-201ENST00000303383 GJA1P17302 382 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms