RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ACDQ96AP0 544 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 DUS3LQ96G46 650 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 CSPG4P5Q96PW8 444 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TASP1Q9H6P5 420 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 GBA2Q9HCG7 927 aaPredicted RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 RNF103O00237 685 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SDHDO14521 159 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 DPYSL4O14531 572 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TNNC2P02585 160 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ATP6V1B2P21281 511 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SDC4P31431 198 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 GRIA3P42263 894 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 EIF2B2P49770 351 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 KPNA1P52294 538 aaPredicted RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 MLLT10P55197 1068 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 DPYSL2Q16555 572 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 PITRM1Q5JRX3 1037 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 REP15Q6BDI9 236 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 CHST15Q7LFX5 561 aaPredicted RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 OFCC1Q8IZS5 231 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SLC39A3Q9BRY0 314 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 C1QTNF1Q9BXJ1 281 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 MRPL4Q9BYD3 311 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 IL22Q9GZX6 179 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SPATA7Q9P0W8 599 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 CD300AQ9UGN4 299 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 FAM149AA5PLN7 773 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 NFICP08651 508 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 CXCL8P10145 99 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 BMP2P12643 396 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TMED10P49755 219 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 MOGQ16653 247 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ZC3H7AQ8IWR0 971 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 PELI3Q8N2H9 469 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 MFSD2AQ8NA29 543 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TNIP2Q8NFZ5 429 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 DCPSQ96C86 337 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ANKRD36BP1Q96IX9 119 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TCF12Q99081 682 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 NAT9Q9BTE0 207 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TRPC7Q9HCX4 862 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 EIF2B3Q9NR50 452 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 GNPTGQ9UJJ9 305 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ZCWPW2A0A1B0GU75 182 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 PHGDHO43175 533 aaKnown RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MFSD11O43934 449 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MPOP05164 745 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 NME5P56597 212 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 NFATC3Q12968 1075 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 SPANXN3Q5MJ09 141 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 OR52K1Q8NGK4 314 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MAELQ96JY0 434 aaKnown RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 B3GNT5Q9BYG0 378 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 SPAG4Q9NPE6 437 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF302Q9NR11 478 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 RNF146Q9NTX7 359 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 FAM49BQ9NUQ9 324 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 VTI1BQ9UEU0 232 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 SARDHQ9UL12 918 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 GOLGA8TH3BQL2 631 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 YAP1P46937 504 aaKnown RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 NR2C2P49116 596 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 RPS3AP61247 264 aaKnown RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MERTKQ12866 999 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 NEDD8Q15843 81 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 LRRC8EQ6NSJ5 796 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MFSD3Q96ES6 412 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 VPS39Q96JC1 886 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 SLC39A10Q9ULF5 831 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
ZNF558-201ENST00000301475 AP4E1Q9UPM8 1137 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 ERGIC3Q9Y282 383 aa11.02□□□□□ -0.65
ZNF558-201ENST00000301475 MAFGO15525 162 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 B4GALT4O60513 344 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ITGB3P05106 788 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GOT1P17174 413 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SAT1P21673 171 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 HK2P52789 917 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TRAF2Q12933 501 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 RGS21Q2M5E4 152 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 Q3C1V9 767 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms