RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RBM43Q6ZSC3 357 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PSTKQ8IV42 348 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 REEP1Q9H902 201 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CAB39LQ9H9S4 337 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ABCC13Q9NSE7 274 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ARHGAP28Q9P2N2 729 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 COQ6Q9Y2Z9 468 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CENPXA8MT69 81 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PAPSS1O43252 624 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AKR1A1P14550 325 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RPL38P63173 70 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RNASE12Q5GAN4 147 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PACS2Q86VP3 889 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MYLPFQ96A32 169 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EPB41L1Q9H4G0 881 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NT5C1B-RDH14C9J2C7 533 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IDH3BO43837 385 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IL6P05231 212 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HACD1B0YJ81 288 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FSTL1Q12841 308 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BIKQ13323 160 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CTBP1Q13363 440 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FRG1Q14331 258 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLC45A4Q5BKX6 768 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HYIQ5T013 277 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PARGQ86W56 976 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 H0Y858 1186 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 APOC2P02655 101 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ELF3P78545 371 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EVX2Q03828 476 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MADCAM1Q13477 382 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CYP2A13Q16696 494 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CDC73Q6P1J9 531 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CNPY4Q8N129 248 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OR10G6Q8NH81 332 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SUSD6Q92537 303 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SNRNP25Q9BV90 132 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EXO5Q9H790 373 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TNS2Q63HR2 1409 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 VEGFAP15692 232 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 UBA1P22314 1058 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TTC7BQ86TV6 843 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZCCHC2Q9C0B9 1178 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ANAPC2Q9UJX6 822 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TPRKBQ9Y3C4 175 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PRKAB1Q9Y478 270 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SMIM10L2AP0DMW4 78 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SMIM10L2BP0DMW5 78 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AMD1P17707 334 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GLRA2P23416 452 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DGKAP23743 735 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NTSP30990 170 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DGUOKQ16854 277 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RELTQ969Z4 430 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TEKT5Q96M29 485 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLITRK2Q9H156 845 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RABGEF1Q9UJ41 708 aa13.71□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PPRC1Q5VV67 1664 aaKnown RBP13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EPHB6O15197 1021 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MED26O95402 600 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PAEPP09466 180 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ALADP13716 330 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SERPINA4P29622 427 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ARF5P84085 180 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GCNT1Q02742 428 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MAP4K3Q8IVH8 894 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C9orf16Q9BUW7 83 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 COPG2Q9UBF2 871 aa13.71□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DYTNA2CJ06 578 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 B4GALT5O43286 388 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ATP6AP2O75787 350 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NAGLUP54802 743 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MTAPQ13126 283 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms