RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 OR52K1Q8NGK4 314 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 NPLOC4Q8TAT6 608 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 GRIN3AQ8TCU5 1115 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 COX4I2Q96KJ9 171 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 PPP1R36Q96LQ0 422 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 FCRL3Q96P31 734 aaPredicted RBP15.82■□□□□ 0.12
UBAP1-201ENST00000297661 KPNA7A9QM74 516 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 PLIN3O60664 434 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 PRKCGP05129 697 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 MYL4P12829 197 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 MSX2P35548 267 aaPredicted RBP15.82■□□□□ 0.12
UBAP1-201ENST00000297661 NR2C2P49116 596 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 SERPINB9P50453 376 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 NIPAL4Q0D2K0 466 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 PPP2R5DQ14738 602 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 OTUD1Q5VV17 481 aaPredicted RBP15.82■□□□□ 0.12
UBAP1-201ENST00000297661 TMEM53Q6P2H8 277 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 SLC27A1Q6PCB7 646 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 ZNF567Q8N184 647 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 LZTR1Q8N653 840 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 RNF139Q8WU17 664 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 TMEM40Q8WWA1 233 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 APBB2Q92870 758 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 RANBP9Q96S59 729 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 AGAP2Q99490 1192 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 PKP2Q99959 881 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 MAN1C1Q9NR34 630 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 FZD10Q9ULW2 581 aa15.82■□□□□ 0.12
UBAP1-201ENST00000297661 M0QYT0 321 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 MATN2O00339 956 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 CD1EP15812 388 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 TYK2P29597 1187 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 FCGRTP55899 365 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 TRIM32Q13049 653 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ZBTB6Q15916 424 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 KYAT1Q16773 422 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 PRAMEF19Q5SWL8 479 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ZFP1Q6P2D0 407 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 PID1Q7Z2X4 250 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 PLD6Q8N2A8 252 aaKnown RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 TTC39CQ8N584 583 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 RTKNQ9BST9 563 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 NUF2Q9BZD4 464 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 DNAJC28Q9NX36 388 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SPATA7Q9P0W8 599 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 PIN4Q9Y237 131 aaKnown RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 RNF11Q9Y3C5 154 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SNX10Q9Y5X0 201 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ZBTB14O43829 449 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ARHGAP17Q68EM7 881 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 OSTM1Q86WC4 334 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 CHERPQ8IWX8 916 aaKnown RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 HNRNPABQ99729 332 aaKnown RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ADAMTS10Q9H324 1103 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ANLNQ9NQW6 1124 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 UBP1Q9NZI7 540 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 COQ6Q9Y2Z9 468 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SMIM28A0A1B0GU29 152 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 FUOMA2VDF0 154 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 AIM2O14862 343 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 XRCC1P18887 633 aaPredicted RBP15.81■□□□□ 0.12
UBAP1-201ENST00000297661 MATKP42679 507 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 THOP1P52888 689 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SPIDRQ14159 915 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 ZNF792Q3KQV3 632 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 CDKL2Q92772 493 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 PIGVQ9NUD9 493 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 TBC1D23Q9NUY8 699 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 SAGE1Q9NXZ1 904 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 TXNDC16Q9P2K2 825 aa15.81■□□□□ 0.12
UBAP1-201ENST00000297661 FOXD2O60548 495 aaPredicted RBP15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SAT1P21673 171 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 RXRGP48443 463 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 NUDT2P50583 147 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 NDST2P52849 883 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SLC5A3P53794 718 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 ATXN3P54252 364 aaPredicted RBP15.8■□□□□ 0.12
UBAP1-201ENST00000297661 IRF9Q00978 393 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 KLF10Q13118 480 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 NRF1Q16656 503 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 DCAF4L1Q3SXM0 396 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 ZDHHC17Q8IUH5 632 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 ACVR1CQ8NER5 493 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SORT1Q99523 831 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SERPINI1Q99574 410 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 DCUN1D5Q9BTE7 237 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 CAAP1Q9H8G2 361 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 IGSF9Q9P2J2 1179 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 EPS15L1Q9UBC2 864 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 SQORQ9Y6N5 450 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 ZNF195O14628 629 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 ADAM23O75077 832 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 H6PDO95479 791 aa15.8■□□□□ 0.12
UBAP1-201ENST00000297661 MMP3P08254 477 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms