RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SEMA3CQ99985 751 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 NAT9Q9BTE0 207 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 GLOD4Q9HC38 313 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 BPIFA1Q9NP55 256 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 DSEQ9UL01 958 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 ACOT9Q9Y305 439 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 AAR2Q9Y312 384 aaKnown RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 NCAM2O15394 837 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PLIN3O60664 434 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 RAMP2O60895 175 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ATP5HO75947 161 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ANXA9O76027 345 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PROCP04070 461 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 DHRS4L1P0CG22 281 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ENO3P13929 434 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ACVRL1P37023 503 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 GLUD2P49448 558 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 RPS24P62847 133 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 SLC18A2Q05940 514 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TWF1Q12792 350 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 NFE2Q16621 373 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CLLU1OSQ5K130 101 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 SCD5Q86SK9 330 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ZNF781Q8N8C0 355 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 OR7D4Q8NG98 312 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 HDAC10Q969S8 669 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 OLFM3Q96PB7 478 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 MUC3BQ9H195 1237 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TAS2R1Q9NYW7 299 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ANKRD12Q6UB98 2062 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PRRG1O14668 218 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 MTSS1O43312 755 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PIGNO95427 931 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 DLDP09622 509 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 T-ENOLP0DO92 83 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 STMN1P16949 149 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 MPSTP25325 297 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CRHR1P34998 444 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ETV4P43268 484 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 SERPINB8P50452 374 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CDH13P55290 713 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PPIDQ08752 370 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PAFAH1B3Q15102 231 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 KHDC1Q4VXA5 237 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 SPANXN3Q5MJ09 141 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 FAM91A1Q658Y4 838 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 NEPROQ6NW34 567 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TREML1Q86YW5 311 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 OR52K2Q8NGK3 314 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CATSPER2Q96P56 530 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CPNE1Q99829 537 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 BTBD10Q9BSF8 475 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CADM1Q9BY67 442 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 GBA3Q9H227 469 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TRHDEQ9UKU6 1024 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 FAM50BQ9Y247 325 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 FAM95CA0A1B0GW59 222 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CRCPO75575 148 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 AHSGP02765 367 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ELF1P32519 619 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CYP2C18P33260 490 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CASP2P42575 452 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 GRTP1Q5TC63 336 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 CNSTQ6PJW8 725 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TAS1R1Q7RTX1 841 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TDRD5Q8NAT2 981 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 PPFIBP2Q8ND30 876 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 USP13Q92995 863 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 HDAC11Q96DB2 347 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 TMA16Q96EY4 203 aaKnown RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 SERPINB11Q96P15 392 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
PRDM9-201ENST00000296682 IL22Q9GZX6 179 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ZCWPW1Q9H0M4 648 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 GPAMQ9HCL2 828 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 KANSL3Q9P2N6 904 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 XPR1Q9UBH6 696 aa9.43□□□□□ -0.9
PRDM9-201ENST00000296682 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TMEM233B4DJY2 109 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SUPT7LO94864 414 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 CDK18Q07002 472 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TMEM198Q66K66 360 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 MON1AQ86VX9 555 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TMEM173Q86WV6 379 aaPredicted RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 RBM15BQ8NDT2 890 aaKnown RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 KLHDC9Q8NEP7 349 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 CCDC68Q9H2F9 335 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 FAM96AQ9H5X1 160 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 IL1RL2Q9HB29 575 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ARHGEF3Q9NR81 526 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 COPG2Q9UBF2 871 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ADAM28Q9UKQ2 775 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms