RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 PROSER1Q86XN7 944 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 TDRPQ86YL5 185 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 PROX1Q92786 737 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 PRMT6Q96LA8 375 aaPredicted RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 DDX43Q9NXZ2 648 aaKnown RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 MRPL39Q9NYK5 338 aaKnown RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 OPTCQ9UBM4 332 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 SLC12A4Q9UP95 1085 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 MAPRE3Q9UPY8 281 aa11.16□□□□□ -0.62
PBRM1-201ENST00000296302 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
PBRM1-201ENST00000296302 H7C0S8 307 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 NOS2P35228 1153 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 IDH2P48735 452 aaKnown RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 IL2P60568 153 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 CRADDP78560 199 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 C15orf59Q2T9L4 293 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 STK40Q8N2I9 435 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 C12orf50Q8NA57 414 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 LEMD2Q8NC56 503 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 ASZ1Q8WWH4 475 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 EDEM1Q92611 657 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 SNRNP25Q9BV90 132 aaKnown RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 VPS45Q9NRW7 570 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 DNAJC28Q9NX36 388 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 TBC1D30Q9Y2I9 924 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 SPACA6W5XKT8 324 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 PIK3C2BO00750 1634 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 LACTBL1A8MY62 500 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 CYP2C18P33260 490 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 RAB15P59190 212 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 PRKG2Q13237 762 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 ERAP2Q6P179 960 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 ZNF549Q6P9A3 640 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 C4orf32Q8N8J7 132 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 MAB21L3Q8N8X9 362 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 TNFRSF25Q93038 417 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 WNT8BQ93098 351 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 SERPINB11Q96P15 392 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 TRMOQ9BU70 441 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 OSBPL6Q9BZF3 934 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 VWDEQ8N2E2 1590 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 GPR182O15218 404 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 CNPP09543 421 aaKnown RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 PRDX6P30041 224 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 STAT5AP42229 794 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 CENPAP49450 140 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 SLC7A2P52569 658 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 LSM3P62310 102 aaKnown RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 KRT74Q7RTS7 529 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 UNC93AQ86WB7 457 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 MYLPFQ96A32 169 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 Q96MT0 163 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 PARK7Q99497 189 aaKnown RBP11.15□□□□□ -0.62
PBRM1-201ENST00000296302 TRPC4Q9UBN4 977 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 LNPEPQ9UIQ6 1025 aa11.15□□□□□ -0.62
PBRM1-201ENST00000296302 TSPOAP1O95153 1857 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 H7C4K7 107 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.63
PBRM1-201ENST00000296302 HPCAL1P37235 193 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 RPS6KA3P51812 740 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 SPIDRQ14159 915 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 KHDC1Q4VXA5 237 aaKnown RBP11.15□□□□□ -0.63
PBRM1-201ENST00000296302 ZCCHC8Q6NZY4 707 aaKnown RBP11.15□□□□□ -0.63
PBRM1-201ENST00000296302 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 HPS6Q86YV9 775 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 SLC2A14Q8TDB8 520 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 COLEC11Q9BWP8 271 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 TTYH3Q9C0H2 523 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 ATXN3LQ9H3M9 355 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 TRIM39Q9HCM9 518 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 PRDM5Q9NQX1 630 aaPredicted RBP11.15□□□□□ -0.63
PBRM1-201ENST00000296302 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 VPS28Q9UK41 221 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 CHD1O14646 1710 aa11.15□□□□□ -0.63
PBRM1-201ENST00000296302 PEX11AO75192 247 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 AVILO75366 819 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CST1P01037 141 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 IDO1P14902 403 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 MAPKAPK3Q16644 382 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 EGFLAMQ63HQ2 1017 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 MCOLN3Q8TDD5 553 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 HPS1Q92902 700 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 REPS1Q96D71 796 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 SMARCD1Q96GM5 515 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CATSPERZQ9NTU4 200 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ATP6V1HQ9UI12 483 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TGFB1I1O43294 461 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 HGFP14210 728 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TFEBP19484 476 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms