RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FZD9O00144 591 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 MAFO75444 373 aaPredicted RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 DLGAP3O95886 979 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 CCNE2O96020 404 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 NFICP08651 508 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FASP25445 335 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 GBE1Q04446 702 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 TLE2Q04725 743 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SPDYE7PQ495Y7 208 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 MARC1Q5VT66 337 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SH3BP5LQ7L8J4 393 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 RRM2BQ7LG56 351 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 STK32CQ86UX6 486 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 BANPQ8N9N5 519 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 PLEKHO2Q8TD55 490 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 GPR152Q8TDT2 470 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 LENG9Q96B70 501 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 RNF145Q96MT1 663 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 B3GNT5Q9BYG0 378 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 KRT8P05787 483 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 APOA4P06727 396 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 HTRA3P83110 453 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 RALGDSQ12967 914 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 MSS51Q4VC12 460 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SCLYQ96I15 445 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SPATA16Q9BXB7 569 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 POLR1BQ9H9Y6 1135 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 PAPSS1O43252 624 aaPredicted RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 MAPK9P45984 424 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 GRIA4P48058 902 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 CCR3P51677 355 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 NR1H2P55055 460 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 KLF10Q13118 480 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 DMC1Q14565 340 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 MTX3Q5HYI7 312 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FAM47BQ8NA70 645 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 PRR11Q96HE9 360 aaPredicted RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 MFSD14AQ96MC6 490 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 ZNF358Q9NW07 568 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FAM50BQ9Y247 325 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 ANKRD12Q6UB98 2062 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 GLUD1P00367 558 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SERPINB10P48595 397 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 CCL14Q16627 93 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 POM121L1PQ3SYA9 428 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FAM183BPQ6ZVS7 135 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 UNC5BQ8IZJ1 945 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 PPTC7Q8NI37 304 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 KCTD4Q8WVF5 259 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 TSPAN17Q96FV3 270 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 SERPINB11Q96P15 392 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 RERGLQ9H628 205 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 PNMA8BQ9ULN7 279 aaPredicted RBP13.6□□□□□ -0.23
HPS3-201ENST00000296051 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 LRRC42Q9Y546 428 aa13.6□□□□□ -0.23
HPS3-201ENST00000296051 FAM95CA0A1B0GW59 222 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 APOA1P02647 267 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 MMP3P08254 477 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 MPSTP25325 297 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 PIK3R1P27986 724 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 GEMP55040 296 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 FAM162AQ96A26 154 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 CDK5RAP1Q96SZ6 601 aaKnown RBP13.59□□□□□ -0.23
HPS3-201ENST00000296051 ACE2Q9BYF1 805 aaPredicted RBP13.59□□□□□ -0.23
HPS3-201ENST00000296051 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 SFMBT1Q9UHJ3 866 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 TNFSF13BQ9Y275 285 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 BAZ2AQ9UIF9 1905 aaKnown RBP13.59□□□□□ -0.23
HPS3-201ENST00000296051 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 PGAM1P18669 254 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 TTLL9Q3SXZ7 439 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 CCDC153Q494R4 210 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 SERPINA13PQ6UXR4 307 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 LRRC8DQ7L1W4 858 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
HPS3-201ENST00000296051 CERS2Q96G23 380 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 APOBEC3GQ9HC16 384 aaKnown RBP13.59□□□□□ -0.23
HPS3-201ENST00000296051 NFAT5O94916 1531 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 ZNF536O15090 1300 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 C9JVG2 144 aa13.59□□□□□ -0.23
HPS3-201ENST00000296051 LTFP02788 710 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms