RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ITGA2BP08514 1039 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PLCL1Q15111 1095 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 USP6NLQ92738 828 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PPP3R2Q96LZ3 170 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ARL15Q9NXU5 204 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ARHGAP28Q9P2N2 729 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ATXN2Q99700 1313 aaKnown RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 RGSL1A5PLK6 1076 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SNRPB2P08579 225 aaKnown RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 CCDC166P0CW27 439 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TPSB2P20231 275 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ICAM3P32942 547 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ACSM2AQ08AH3 577 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TPSAB1Q15661 275 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 RAP1GAP2Q684P5 730 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ACSM2BQ68CK6 577 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ADHFE1Q8IWW8 467 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 RNF145Q96MT1 663 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 NFKBIZQ9BYH8 718 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ALG9Q9H6U8 611 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TRAV19A0A0A6YYK7 116 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PPP1R11O60927 126 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 EPN2O95208 641 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TCF3P15923 654 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 GOT1P17174 413 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 HOXB6P17509 224 aaKnown RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 NOMO1Q15155 1222 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 KHDRBS2Q5VWX1 349 aaKnown RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LIPMQ5VYY2 423 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 HGSNATQ68CP4 663 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ZDHHC13Q8IUH4 622 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SYT12Q8IV01 421 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ATAD3AQ9NVI7 634 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LEF1Q9UJU2 399 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PCDHGC3Q9UN70 934 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 WNT7AO00755 349 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 TRAFD1O14545 582 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MAGEC1O60732 1142 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MYBL2P10244 700 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 COX4I1P13073 169 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 HPGDP15428 266 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 ERCC2P18074 760 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 TTKP33981 857 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 C9orf57Q5W0N0 161 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CASP12Q6UXS9 341 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 TRABD2AQ86V40 505 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CAMK1DQ8IU85 385 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CCDC3Q9BQI4 270 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 A0A088AWK7 358 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 TRIM24O15164 1050 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 HDAC3O15379 428 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 RGS5O15539 181 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CALCAP01258 141 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 GSTM1P09488 218 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF10P21506 573 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CXCR2P25025 360 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CENPAP49450 140 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 SKP1P63208 163 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 SETMARQ53H47 684 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 INTS11Q5TA45 600 aaKnown RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 EEF1DP3Q658K8 133 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 HJURPQ8NCD3 748 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 GPR20Q99678 358 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 SLC28A1O00337 649 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 SGTAO43765 313 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 DLGAP3O95886 979 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 C4BPAP04003 597 aaKnown RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 FGF1P05230 155 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 GRIA4P48058 902 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 NAGLUP54802 743 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 BST1Q10588 318 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MFSD5Q6N075 450 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 FAM35AQ86V20 835 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 INVSQ9Y283 1065 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 FAM237BA0A1B0GVD1 139 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 MTA2O94776 668 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 BNIP2Q12982 314 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 C16orf59Q7L2K0 433 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 PTGR2Q8N8N7 351 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-201ENST00000292478 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
PTCD1-201ENST00000292478 TK2O00142 265 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PEX1O43933 1283 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 BCL10O95999 233 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 JAM2P57087 298 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PFKFB4Q16877 469 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms