RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CLCN6P51797 869 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 SLC20A2Q08357 652 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 WDR93Q6P2C0 686 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 RGL4Q8IZJ4 473 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 NDUFAF2Q8N183 169 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 OR6P1Q8NGX9 317 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 EXOC4Q96A65 974 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 HACD3Q9P035 362 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 MFHAS1Q9Y4C4 1052 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 RAD51CO43502 376 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 FDFT1P37268 417 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 PAPOLAP51003 745 aaKnown RBP8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 CEP128Q6ZU80 1094 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 MFN1Q8IWA4 741 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 AHI1Q8N157 1196 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 KDM1BQ8NB78 822 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 NOA1Q8NC60 698 aaKnown RBP8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ATG4AQ8WYN0 398 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 OR51B4Q9Y5P0 310 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 A0A0A0MRY4 1105 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 H0Y626 953 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ARNTLO00327 626 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 GPC4O75487 556 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 IRAK1P51617 712 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 CDH18Q13634 790 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 DHCR24Q15392 516 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 TTC23LQ6PF05 361 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ACDQ96AP0 544 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 HMCESQ96FZ2 354 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 SPATA13Q96N96 652 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 IL12RB2Q99665 862 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 FOXP3Q9BZS1 431 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 KLHL8Q9P2G9 620 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 PSMD3O43242 534 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ASLP04424 464 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 GLULP15104 373 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 RENBPP51606 427 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 KRT71Q3SY84 523 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 DUPD1Q68J44 220 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 TANGO2Q6ICL3 276 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ARHGEF18Q6ZSZ5 1173 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 IFT20Q8IY31 132 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 SNF8Q96H20 258 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ERP44Q9BS26 406 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 FRMD8Q9BZ67 464 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 CEP44Q9C0F1 390 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 ATP8A1Q9Y2Q0 1164 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 BDP1A6H8Y1 2624 aa8.58□□□□□ -1.04
PTPDC1-201ENST00000288976 KRT14P02533 472 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 VAV1P15498 845 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 RPS24P62847 133 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 THOC5Q13769 683 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 HNRNPDQ14103 355 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 CARNMT1Q8N4J0 409 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TTC17Q96AE7 1141 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ALG14Q96F25 216 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 SP110Q9HB58 689 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 DFFAO00273 331 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 NPC1O15118 1278 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 PEX11BO96011 259 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 CSNK1DP48730 415 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 INO80DQ53TQ3 878 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 RHBDF2Q6PJF5 856 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TAOK1Q7L7X3 1001 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ETFBKMTQ8IXQ9 262 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 HPS4Q9NQG7 708 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 GGA2Q9UJY4 613 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 RAB21Q9UL25 225 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNN4O15554 427 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TSPAN3O60637 253 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ZMPSTE24O75844 475 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 IL1RL1Q01638 556 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 AFAP1L2Q8N4X5 818 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 LRRN4CLQ8ND94 238 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ISG20Q96AZ6 181 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 P2RY11Q96G91 374 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 LRRC3BQ96PB8 259 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 FEM1AQ9BSK4 669 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 LRRC1Q9BTT6 524 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 C2orf49Q9BVC5 232 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TRMT61BQ9BVS5 477 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 BBS2Q9BXC9 721 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 GBA3Q9H227 469 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 NDFIP2Q9NV92 336 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 WNT6Q9Y6F9 365 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 AKAP6Q13023 2319 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ERI2A8K979 691 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TTI1O43156 1089 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms