RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ARRDC2Q8TBH0 407 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PTPRN2Q92932 1015 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZNF778Q96MU6 729 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 RNF38Q9H0F5 515 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 MAGEH1Q9H213 219 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZNF334Q9HCZ1 680 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 NSMCE4AQ9NXX6 385 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TXNDC16Q9P2K2 825 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 STOML2Q9UJZ1 356 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZFP37Q9Y6Q3 630 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 HELZP42694 1942 aaKnown RBP10.32□□□□□ -0.76
C9orf43-201ENST00000288462 MYO1CO00159 1063 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 KLF11O14901 512 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 GLRA3O75311 464 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 CLDN11O75508 207 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 LATS1O95835 1130 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 CTSAP10619 480 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 ELF1P32519 619 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 CD86P42081 329 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 MAXP61244 160 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 DSC2Q02487 901 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 GNA12Q03113 381 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 PDE1CQ14123 709 aaPredicted RBP10.32□□□□□ -0.76
C9orf43-201ENST00000288462 POU6F1Q14863 301 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 SMAD1Q15797 465 aaKnown RBP10.32□□□□□ -0.76
C9orf43-201ENST00000288462 TAF12Q16514 161 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 DBN1Q16643 649 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 HSP90AA5PQ58FG0 334 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 RNF187Q5TA31 235 aaPredicted RBP10.32□□□□□ -0.76
C9orf43-201ENST00000288462 RNF43Q68DV7 783 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 OTOAQ7RTW8 1153 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 STRA8Q7Z7C7 330 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 WBP2Q969T9 261 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 AGAP2Q99490 1192 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 MANSC1Q9H8J5 431 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 TREX1Q9NSU2 369 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
C9orf43-201ENST00000288462 PCDHB12Q9Y5F1 795 aa10.32□□□□□ -0.76
C9orf43-201ENST00000288462 A0A1B0GVM2 712 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 WDR91A4D1P6 747 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 TCAF2A6NFQ2 919 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SIN3BO75182 1162 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 FGF18O76093 207 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 F11P03951 625 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ARNTP27540 789 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SPRP35270 261 aaPredicted RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 CHRNA4P43681 627 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SERPINB8P50452 374 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SGSHP51688 502 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 RPS24P62847 133 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SF3A3Q12874 501 aaKnown RBP eCLIP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 MSLNQ13421 630 aaPredicted RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SPRED3Q2MJR0 410 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ADGRF1Q5T601 910 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 KIAA0930Q6ICG6 404 aaPredicted RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 KYAT3Q6YP21 454 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 C16orf59Q7L2K0 433 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 OTOP2Q7RTS6 562 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 TRPM8Q7Z2W7 1104 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ITIH5Q86UX2 942 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ZNF354CQ86Y25 554 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 CCDC63Q8NA47 563 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 OR52K2Q8NGK3 314 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SLC13A1Q9BZW2 595 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 GKN1Q9NS71 199 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ABCF3Q9NUQ8 709 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SIRPGQ9P1W8 387 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 AGO1Q9UL18 857 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 A0A0D9SEW6 157 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 BIRC5O15392 142 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 TIMM44O43615 452 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 IRF1P10914 325 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 BGNP21810 368 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 CSRP3P50461 194 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 PDE1BQ01064 536 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SLC14A2Q15849 920 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 PCSK7Q16549 785 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SETD3Q86TU7 594 aaPredicted RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 TRIM42Q8IWZ5 723 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 DCLK2Q8N568 766 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ARMC2Q8NEN0 867 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 RAB3IL1Q8TBN0 382 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 C10orf82Q8WW14 230 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 CLP1Q92989 425 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 DDX50Q9BQ39 737 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 POLR1EQ9GZS1 481 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 ACTR5Q9H9F9 607 aaPredicted RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SNX15Q9NRS6 342 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 IARS2Q9NSE4 1012 aaKnown RBP10.31□□□□□ -0.76
C9orf43-201ENST00000288462 KLHL14Q9P2G3 628 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 EMCNQ9ULC0 261 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 SSX2IPQ9Y2D8 614 aa10.31□□□□□ -0.76
C9orf43-201ENST00000288462 TBC1D30Q9Y2I9 924 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms