RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 GET4Q7L5D6 327 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 SYT12Q8IV01 421 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 CCT7Q99832 543 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 MYOCQ99972 504 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 ANKZF1Q9H8Y5 726 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 FBXO6Q9NRD1 293 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 DEAF1O75398 565 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-201ENST00000287008 ETS1P14921 441 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 CCT8P50990 548 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 FBXW10Q5XX13 1052 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 IYDQ6PHW0 289 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 IL27RAQ6UWB1 636 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 DET1Q7L5Y6 550 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 TMEM245Q9H330 911 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 GMIPQ9P107 970 aa18.74■□□□□ 0.59
PCDH1-201ENST00000287008 IGLV3-22A0A075B6J6 115 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 APODP05090 189 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 ITGAVP06756 1048 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TLX1P31314 330 aaPredicted RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 ICE2Q659A1 982 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 IRF2BP2Q7Z5L9 587 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 KREMEN1Q96MU8 473 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 IKZF4Q9H2S9 585 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CROTQ9UKG9 612 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CACNB4O00305 520 aaPredicted RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 PIGNO95427 931 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 C1RP00736 705 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 KRT8P05787 483 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CLTBP09497 229 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 ELFN1P0C7U0 828 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 NAGLUP54802 743 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 FASTKQ14296 549 aaKnown RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 KHDRBS2Q5VWX1 349 aaKnown RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 POTEHQ6S545 545 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CCDC81Q6ZN84 652 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 RIPOR1Q6ZS17 1223 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 JOSD2Q8TAC2 188 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 USE1Q9NZ43 259 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 FBXO5Q9UKT4 447 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3DA0A087WVF3 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3IA0A087WXS9 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3EA0A087X179 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3KA0A087X1G2 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3FA6NER0 549 aaPredicted RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3LB9A6J9 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 SLC35G4P0C7Q5 338 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3HP0C7X1 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 ACLYP53396 1101 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3GQ6DHY5 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3CQ6IPX1 549 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TBC1D3Q8IZP1 549 aaPredicted RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CFAP52Q8N1V2 620 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CPA6Q8N4T0 437 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 ALLCQ8N6M5 410 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 PIF1Q9H611 641 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 COMMD8Q9NX08 183 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 MSI1O43347 362 aaKnown RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 SLC25A14O95258 325 aaPredicted RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 EOMESO95936 686 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CTPS1P17812 591 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TKTP29401 623 aaKnown RBP18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CLCNKBP51801 687 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CRYMQ14894 314 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 CYP20A1Q6UW02 462 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 VPS45Q9NRW7 570 aa18.73■□□□□ 0.59
PCDH1-201ENST00000287008 TMEM191CA6NGB0 347 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 NUDT14O95848 222 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CST3P01034 146 aaPredicted RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 TCF3P15923 654 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 HNRNPH3P31942 346 aaKnown RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 GNA13Q14344 377 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 GRM3Q14832 879 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CEP68Q76N32 757 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PGM2Q96G03 612 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 KCTD14Q9BQ13 255 aaPredicted RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 ACBD6Q9BR61 282 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PCDH18Q9HCL0 1135 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 SEMA4BQ9NPR2 832 aaPredicted RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 FCGR1AP12314 374 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 KCNA3P22001 575 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 HPCAL1P37235 193 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 MARCKSL1P49006 195 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 SLC5A3P53794 718 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 TRAF2Q12933 501 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 RCN1Q15293 331 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 LYPLAL1Q5VWZ2 237 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 RHBGQ9H310 441 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 LRRC19Q9H756 370 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PCYOX1Q9UHG3 505 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 ZMYND8Q9ULU4 1186 aaPredicted RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 BTNL10A8MVZ5 291 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 FAM220BPB1ANY3 271 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 GRM6O15303 877 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 FAM153BP0C7A2 387 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 VHLP40337 213 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 LILRA4P59901 499 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms