RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CAPN7Q9Y6W3 813 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 KIAA0355O15063 1070 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PRAMEF11O60813 436 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 GLRA3O75311 464 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 STC2O76061 302 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 UBOX5O94941 541 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TOP3BO95985 862 aaKnown RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 KLKB1P03952 638 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TROVE2P10155 538 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ELF1P32519 619 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 CD86P42081 329 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 CHRNA4P43681 627 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PPP3CCP48454 512 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 DSC2Q02487 901 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 VEPH1Q14D04 833 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PCSK7Q16549 785 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PPM1JQ5JR12 505 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 FYB2Q5VWT5 728 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ARMC3Q5W041 872 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 FSTL4Q6MZW2 842 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ESRP1Q6NXG1 681 aaKnown RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 FBXO46Q6PJ61 603 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 DNAJB7Q7Z6W7 309 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 DENND1CQ8IV53 801 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TCEAL8Q8IYN2 117 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PGBD5Q8N414 524 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF398Q8TD17 642 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 C10orf82Q8WW14 230 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 AUTS2Q8WXX7 1259 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PPM1EQ8WY54 764 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ATP2A3Q93084 1043 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 E2F7Q96AV8 911 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ARMC5Q96C12 935 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 MECRQ9BV79 373 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 KLF16Q9BXK1 252 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 MAGEH1Q9H213 219 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 EMCNQ9ULC0 261 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ZFP37Q9Y6Q3 630 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 CCDC78A2IDD5 438 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 H3BNC9 293 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PRRG1O14668 218 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TIMM44O43615 452 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PLIN3O60664 434 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TGDSO95455 350 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 GSRP00390 522 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 MPOP05164 745 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 URODP06132 367 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ACRP10323 421 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 RAG1P15918 1043 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 KCNA4P22459 653 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ALDH3A1P30838 453 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ETFBP38117 255 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ARCN1P48444 511 aaKnown RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 CDH4P55283 916 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 CCDC15Q0P6D6 951 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 TWF1Q12792 350 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 OVGP1Q12889 678 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 PLD1Q13393 1074 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 MSLNQ13421 630 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 RABGAP1LQ5R372 815 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 N4BP2L1Q5TBK1 243 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ATG16L1Q676U5 607 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 SLC25A41Q8N5S1 370 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-201ENST00000276573 RAB3IL1Q8TBN0 382 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF599Q96NL3 588 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 SNX15Q9NRS6 342 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 MAFFQ9ULX9 164 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 SLC12A4Q9UP95 1085 aa9.72□□□□□ -0.85
TRIM55-201ENST00000276573 LTBP2Q14767 1821 aa9.71□□□□□ -0.85
TRIM55-201ENST00000276573 LOC285095A0A1B0GVY8 99 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 C2orf78A6NCI8 922 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 LILRB3O75022 631 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 VAPBO95292 243 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 AHSGP02765 367 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 PRKCGP05129 697 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 CORO1AP31146 461 aaKnown RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 HADHAP40939 763 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 SERPINB8P50452 374 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 SERPINH1P50454 418 aaKnown RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 EPHB3P54753 998 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 GNA12Q03113 381 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 BST1Q10588 318 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 BNIP1Q12981 228 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 CHI3L2Q15782 390 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 CNGA3Q16281 694 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 DBN1Q16643 649 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 ADGRF1Q5T601 910 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 TMCO4Q5TGY1 634 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 CNTN4Q8IWV2 1026 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 GPR65Q8IYL9 337 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 TMEM199Q8N511 208 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 RFWD2Q8NHY2 731 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 WBP2Q969T9 261 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 RANBP9Q96S59 729 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms